Bacterioplanoides sp. SCSIO 12839: KFF03_12210
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Entry
KFF03_12210 CDS
T08310
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03410
Base excision repair
bacz03430
Mismatch repair
bacz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KFF03_12210 (recJ)
03430 Mismatch repair
KFF03_12210 (recJ)
03440 Homologous recombination
KFF03_12210 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacz03400
]
KFF03_12210 (recJ)
DNA repair and recombination proteins [BR:
bacz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KFF03_12210 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KFF03_12210 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KFF03_12210 (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
UTW47344
UniProt:
A0A9J7ACV6
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Position
complement(2664565..2666310)
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AA seq
581 aa
AA seq
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MTQIIQRSLPSQSQLSGVSPILQRIYAARGVTSNDQLELQLNRLLPWQSLKGIEAAVDLL
VPVVTEQKKLLVVGDFDVDGATSTALAIRALGLFGAQNLDYLVPNRFDFGYGLSPELVAV
AAQRQPDLIMTVDNGISSVSGVAAAQAHGIPVLVTDHHLPGDELPAAAAIVNPNQPGCEF
ASKAACGCTVVFYVMLALRARLSDMGWFADQQAPNMGQLLDLVALATVADVVPLDFNNRI
LVEQGLRRIRAGQVQPGIQALLQVAGKSVSRVVSSDFGFALGPRINAAGRLDDMSLGIEC
LLTSSASLALSMAQELDEMNRSRRDIEQGMQHEAMQYVKQFEQSENLPVGLCLYQPDWHQ
GVIGILASRIKDKVHRPVIAFAADSAFADDKDSALPELKGSARSISGLHMRDVLDEVDKR
HPGVIKKFGGHAMAAGLTLNPGGYDTFANAFNQVCATHLKAEQLQQVIESDGELSQSDFT
LAMAQELKWAGPWGQAFPEPLFHGEFRLIQQRIVGERHLKLVMQPLNSQLLIDAIYFNIE
PTQWPNYRDDAVVAAFQLDVNEFRGEQNVQLLIRHLEFSTP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgactcagattattcagcgctcgttaccctcacaatcgcagttatccggggtgtccccg
attctgcaacgcatttatgccgctcgcggtgtgacttccaatgaccagcttgagcttcag
ctgaaccgtttattgccctggcaatcactcaaagggattgaagcggccgtcgatttgttg
gtgccggttgtcactgagcaaaaaaagttattagtggtcggagacttcgatgtcgatggt
gccaccagtaccgccttggcgattcgtgctctgggtttattcggggcgcagaatctcgat
tatctggtacccaaccggtttgattttggttacggcttatcccccgagttagtggcggtt
gctgcgcaacgccaaccggatctgattatgacggttgataatggcatttcgtcggttagt
ggtgtcgcagcggcgcaggctcacggtattccggtattggtcacagatcatcatttgccc
ggtgatgaattacccgctgccgcagccattgtgaatcctaatcagcctggctgtgaattt
gcctcgaaagcggcttgtggttgtacggtggtgttttatgtgatgctggcattacgtgca
cgattgagtgatatgggttggtttgctgaccaacaagcgcccaatatgggccagttattg
gatttagtggccctggcgacagtcgccgatgtggtaccgctggattttaataatcgcatc
ctggttgagcaggggctcaggcgcattcgtgccgggcaggtgcagcctggtattcaggca
ttattacaagttgccggaaaaagtgtatcccgggttgtttcgtccgattttggttttgct
ctcgggccacgcattaatgctgcaggacgactcgatgatatgtcgctgggtattgaatgt
ttattaacgtccagcgcgtcattggcgttgtcgatggcgcaggaactggacgagatgaac
cgcagtcgccgtgacattgagcaaggtatgcagcatgaggcgatgcagtatgtgaaacaa
ttcgagcagagcgagaacctgcctgtgggcttgtgtctgtatcagccggactggcatcag
ggcgtgattggtattctggcatcacggattaaagacaaagtgcatcgccctgtcattgct
tttgctgccgacagtgcgtttgctgacgacaaagacagcgctttgccggaattaaaaggc
tctgcccggtcgatttccgggttgcatatgcgcgatgttctggacgaagtggataaacgc
catccgggggtgatcaagaagtttggcggtcatgcgatggcggccggtttaacactgaat
cccggtggttatgacacctttgccaatgcatttaatcaggtgtgtgccacacacctgaaa
gcggagcagttgcagcaggtcattgagtccgatggtgagctgagccagtctgacttcacg
ttagcgatggcgcaggagttgaagtgggccggaccatgggggcaggcatttcctgaacca
ttgtttcatggcgagttccgcttgattcagcagcgtatcgttggtgaacgacatttaaag
ctggtgatgcagccattgaacagtcagctgttgatcgatgctatttattttaatatcgag
ccaacacaatggccgaattatcgtgatgacgctgtggttgcggcgtttcaattagatgtg
aatgaatttcgcggtgagcagaatgtgcagttgttgattcgtcacctggagttttcgaca
ccttaa
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