Bacterioplanoides sp. SCSIO 12839: KFF03_13895
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Entry
KFF03_13895 CDS
T08310
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacz03021
]
KFF03_13895 (rpoS)
Transcription machinery [BR:
bacz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KFF03_13895 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
7TMR-DISMED2
Motif
Other DBs
NCBI-ProteinID:
UTW47650
UniProt:
A0A9J7AFK1
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All DBs
Position
complement(3072319..3073284)
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AA seq
321 aa
AA seq
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MAAQQRELREEDVFEDVEALALVEESGDEAKSDERFAADTSYKALDATQLYLNEIGFSPL
LSAEEEVHYARLARKGDEMGRRRMIESNLRLVVKISRRYVNRGLSLLDLIEEGNLGLIRA
VEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARELTQKLD
HEPTAEEIAELLEKPVADVKRMLKLNERVTSVDTPLGPSSDKSVLDTIADERVSDPSEEL
QNQDIHANLGQWIEELPEKQREVLSRRFGLRGYETSTLEDVGREIGLTRERVRQIQVEAL
KRLREIMEKQGLNAMTLFGEI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacaacaacgtgaattacgcgaagaagacgtttttgaagatgtagaagcactg
gctctggttgaagagtcaggcgatgaggcaaaatcagacgaacgttttgccgcagatacc
tcatataaagcactggacgcaactcagttatatctgaacgaaattggcttctcaccgtta
ttgtcagccgaagaagaagtgcattacgcacgtctggctcgcaaaggtgacgaaatgggc
cgtcgtcgtatgatcgaaagtaacctgcgactggtggtaaaaatctcccgtcgttacgtg
aatcgtggtttatcactgctggatctgatcgaagaaggcaacctgggcctgattcgtgcc
gttgaaaagttcgatccggagcgtggtttccgtttctcaacctacgcaacctggtggatt
cgccagaccatcgaacgtgccatcatgaatcagacccgcaccatccgtctgccgattcat
gtagtcaaagaattaaatgtttacctgcgtgctgcccgcgagctgactcagaagctggat
catgagccaaccgcagaagagattgctgagctgttagaaaagccggtagcggacgttaag
cgcatgctgaagctgaatgagcgtgttacttcggtagacacgccattaggtccaagctct
gacaagtctgtactggataccattgcagatgaacgtgtgtctgacccaagtgaagagctg
cagaatcaggacattcacgccaacctgggccagtggattgaagagctgccagaaaaacaa
cgtgaggtattatcccgtcgcttcggtctgcgcggttacgaaaccagcaccttggaagat
gtgggccgtgaaattggtctgacccgtgagcgtgttcgccagattcaggttgaagctctg
aagcgtctgcgcgagatcatggaaaaacaaggtctgaacgcgatgaccctttttggtgaa
atttga
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