Bacterioplanoides sp. SCSIO 12839: KFF03_16790
Help
Entry
KFF03_16790 CDS
T08310
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFF03_16790 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacz03019
]
KFF03_16790 (rppH)
Messenger RNA biogenesis [BR:
bacz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KFF03_16790 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
NUDIX_2
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UTW48186
LinkDB
All DBs
Position
complement(3735752..3736246)
Genome browser
AA seq
164 aa
AA seq
DB search
MIDEQGYRPNVGIILCNDKGQVLWARRIGQDAWQFPQGGIKKGESPEKALYRELTEEVGL
TKEDVQIMGCTRGWLRYRLPRRMIRHDSHPVCVGQKQKWYLLKLTADDSKINVRLGDKPE
FDGWRWVSYWFPLGKVVAFKRDVYRRAMSELSPRIAKLQRNAQL
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gtgattgacgagcagggttaccggcccaacgtcggcatcatcctttgtaacgacaaaggt
caggtgttatgggcgcggagaattggtcaagatgcctggcagtttccccaaggcgggata
aagaagggggaatccccggaaaaggcattgtatcgagagctgaccgaagaggttggcctg
acaaaagaagatgtgcaaattatgggttgtactcgtggttggttaaggtaccggctgccg
cgtcgtatgatccgccatgacagtcacccggtgtgcgttggccagaagcagaaatggtat
ctgctaaaactgaccgccgatgactcaaagatcaatgtacgcttgggcgataaacctgag
tttgatggctggcgctgggtcagctattggttccctctggggaaggtggtggcctttaag
cgcgatgtctatcgtcgggcaatgagtgagctgtcaccgcggattgccaagctacaacgt
aacgctcagctataa
DBGET
integrated database retrieval system
