Bifidobacterium adolescentis ATCC 15703: BAD_0260
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Entry
BAD_0260 CDS
T00437
Symbol
pnpA
Name
(GenBank) polynucleotide nucleotidyl transferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Pathway
bad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAD_0260 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bad03019
]
BAD_0260 (pnpA)
03016 Transfer RNA biogenesis [BR:
bad03016
]
BAD_0260 (pnpA)
Enzymes [BR:
bad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BAD_0260 (pnpA)
Messenger RNA biogenesis [BR:
bad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BAD_0260 (pnpA)
Transfer RNA biogenesis [BR:
bad03016
]
Prokaryotic type
tRNA degradation factors
BAD_0260 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
PCB_OB
DUF1773
S1_2
Motif
Other DBs
NCBI-ProteinID:
BAF39041
UniProt:
A1A008
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All DBs
Position
344051..346729
Genome browser
AA seq
892 aa
AA seq
DB search
MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDVVALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVVENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKV
ICEAQAELKKIAAKETKEFQLFPEYTEDLYNRIDEIAHADLDEALSIAEKLPRQDRIHEI
KEGVKATLAGEFTDMEDAEKDKEIGNAFKELQRQIVRRRILTQDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGQHIYKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILASALQQAKEARTTILEVINECIDGPAEMSPYAPRIITTTVPVDKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVYISSEGGEAAEKAKEIIDQIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD
DRGKISLAIPGFEDQESSAPRRDRGDRDDRRGGRGRRDDRRRSDDRDDRDYDDRPRRRRS
DRDDDRDYDDRPRRRRSDRDDRDYDRDDRRSSRSDRDDRDYDDRPRRRRSDRDDRDYDRD
DRRSDRRRGSRRDDRNPRYAADENYDEYRADREERSERPRRRVRRDFDPFED
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggctgttgaagccgtaatcgataatggttcattcggcaag
cgcacgctgcgcttcgagaccggtcgtctcgcccagcaggcggatggtgccgtcgccgcc
tatcttgacgatgattcgatgattctgtccacgaccaccgccggttccagcccgaaggag
aactacgacttcttcccgctgaccgtggacgtggaagagaagatgtacgcagccggcaag
atcccgggctcgttcttccgccgcgaaggccgtccgagctccgaagccatcctggcctgc
cgcatcatcgaccgtccgttgcgtccgctgttcccgcacaccctgcgcaacgaagtgcag
gtcgtcgaaaccgtgctcgccgtcaacccggatgacgcatacgacgtcgtcgcactgaac
gccgcctccgcctccaccatgatctccggcctgccgttcgaaggcccggtctccggcgtg
cgtctggccctgatcgacggccagtgggtcgccttcccgcgctggagcgagcgcgaacgc
gccgtgttcgaaatcgtggtcgccggccgcgttgtcgagaacggcgacgtcgccatcgcc
atgatcgaagccggtgccggcaagaacgcatggcacctcatctacgacgaaggccagacc
aagccggacgaggaagtcgtcgccggcggtcttgaagccgccaagccgttcatcaaggtg
atctgcgaggcccaggccgagctcaagaagatcgccgcgaaggaaaccaaggaattccag
ctcttcccggagtacaccgaggatctgtacaaccgcatcgacgagatcgcccacgccgac
ctcgacgaagccctgtccatcgccgaaaagctgccgcgccaggaccgcatccacgagatc
aaggaaggcgtcaaggccaccctcgccggcgagttcaccgacatggaagacgccgagaag
gacaaggaaatcggcaacgcgttcaaggagctgcagcgccagatcgtgcgccgccgcatc
ctgacccaggactaccgcatcgacggccgtggcctgcgtgacatccgcaccctgtccgcc
gaagtggacatcgtgccgcgcgtgcacggctccgcactgttccagcgtggcgaaacccag
attctgggcgtcaccaccctgaacatgctcaagatggagcagcaaatcgacgcgctgtcc
ggcccgcagtccaagcgctacatgcacaattacgaaatgccgccgtactccaccggtgag
accggccgcgtcggttccccgaagcgccgcgagatcggccatggcgccctcgccgagaag
gccctcgtgccggtgctgccgagccgtgaggagttcccgtacgccatccgtcaggtctcc
gaggcaatcggctccaacggttccacctccatgggttccgtctgcgcctccacgctgtcc
ctgctcgccgctggcgttccgctgaaggctccggtcgcaggcatcgccatgggcctcgtg
tccggcgacgtcgacggccagcacatctacaagacgctcaccgacatcctcggcgccgaa
gacgccttcggcgacatggacttcaaggtggccggcacctccgaattcatcaccgccctg
cagctcgacaccaagctcgacggcattccggccgacatcctggcgtccgccctgcagcag
gccaaggaagcccgcaccaccatccttgaagtcatcaacgagtgcatcgacggcccggcc
gagatgagcccgtacgcgccgcgcatcatcaccaccaccgttccggtggacaagatcggc
gaggtcatcggcccgaagggcaagatgatcaaccagatccaggaagacaccggcgccgaa
atcgccatcgaggatgacggcaccgtgtacatctcctccgaaggcggcgaggccgccgag
aaggccaaggagatcatcgaccagatcgccaacccgcacgtgccggaagccggcgagacc
tacaacggcaaggtcgtgaagaccacctccttcggcgccttcgtgaacctgaccccgggc
accgacggtctgctgcacatctcccagatccgcaacctcgccaacggcgagcgcatcgac
gccgtcgaagacgtgctcaaggaaggcgacaccgttgaggtggtcgtgcagggtgttgac
gatcgcggcaagatctcccttgccatcccgggcttcgaggatcaggaatcctccgctccg
cgtcgtgaccgtggcgatcgcgatgaccgccgtggcggccgtggccgtcgtgacgaccgc
cgtcgttccgacgatcgcgatgatcgcgattatgatgatcgtccgcgtcgccgtcgttcc
gaccgcgatgacgatcgtgattatgatgatcgtccgcgtcgccgtcgttccgaccgtgac
gatcgcgactacgatcgtgacgaccgccgttcgtcccgttccgatcgcgatgatcgtgat
tatgatgatcgtccgcgtcgccgtcgttccgaccgcgatgaccgtgactacgatcgcgat
gaccgccgttccgaccgtcgccgtggtagccgtcgtgacgaccgcaacccgcgttacgcc
gccgacgagaactacgacgagtaccgtgccgatcgcgaagagcgctccgagcgtccgcgt
cgccgcgtgcgccgcgactttgatccgttcgaagactga
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