Bifidobacterium adolescentis ATCC 15703: BAD_0693
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Entry
BAD_0693 CDS
T00437
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Pathway
bad03420
Nucleotide excision repair
bad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAD_0693 (uvrD1)
03430 Mismatch repair
BAD_0693 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bad03400
]
BAD_0693 (uvrD1)
Enzymes [BR:
bad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAD_0693 (uvrD1)
DNA repair and recombination proteins [BR:
bad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAD_0693 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
BAD_0693 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
CarD_TRCF_RID
DUF2474
AAA_22
Herpes_UL42
Motif
Other DBs
NCBI-ProteinID:
BAF39474
UniProt:
A1A191
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All DBs
Position
871127..873766
Genome browser
AA seq
879 aa
AA seq
DB search
MGPVMCDPRSLIEGLNPQQEEAVKYYGQALLIGAGAGSGKTRVLTRRIAWLLAHGFWASS
ILAITFTNKAAAEMRERLVTLVGPEAEHMWISTFHSACVRILRRDGKEIGLKSGFSIYDT
ADSERLVKLIAADLNIDTKRYTPRMLLGKISDCKNALVSWKDQLKKANCDYTPGQRGYQV
SAGDVDELVAVVYAEYQHRLALANAVDFDDLIMRTVELLQTCPQVSEYYRHRFRYIFVDE
YQDTNHAQYVLVRELSGIDSDEQPDPQARGAGRVGPSWITVVGDSDQSIYAFRGADIRNI
QDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIAKNENRKPKKLWTALGQGDKIVGYAAD
NAQQEAGWIANEIARIHTEEDVAYRDIAIMYRANAQSRSLEEAMINANLPYQLVGGTKFY
ERREVKDAIAYLQAIVNPADNVNVRRILNVPKRGLGARAEGLVAGYADAHGLTFFESIEH
MDQIEGMTGRTTKPLGAFRDLMHELADFAKEHDSKPSEVVAEVLDKSGLLEELQRSEDPQ
DASRVDNLSQLQSVAAEFEQNTPDATLAGFLETTALVADSDQLPGEGEDSGKVTMMTLHT
AKGLEYPYVFLTGMEQGTFPHQRAMEDTSELSEERRLAYVGITRAKRRLYVTRAAVRAQW
GQANDMMPSQFLDEIPDELIDWKRREAGVERMRASWGDDDEFGGWDDDDDFGSTSFGGSM
YGSSTYGSSSYGSGSRGSHPTYGSSHGSHSSYGSGRSSYGSGSRRFSGGSHSGSSSYGSY
GSSRSSYGSGKPSGKSGKVTTRRAKPKDLTKSAPASSLDGNNGLSISDFQIGDRITHDHY
GLGKVIETQDKGANSVITVDFGTDGVKRLLLRVAPIEKL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggacctgtgatgtgcgatccgcggagcctgatagagggactcaacccccaacaggaa
gaagcggtgaaatactacggccaggcattgctcatcggcgccggcgcaggctcaggcaag
acccgtgtgctgacacgtcgcatcgcatggctgctggcgcatggcttctgggcaagcagc
atcctcgccatcaccttcaccaacaaggcggccgcggaaatgcgtgaacgtctcgtgact
ttggtcgggccggaagccgaacatatgtggatctccaccttccactccgcctgcgtacgc
atcctacgccgcgacggcaaggaaatcggccttaaatcgggcttctcgatttacgacacc
gcggacagcgagcgactggtcaaactgatcgcagccgacctgaacatcgatacgaagcgg
tatacgccacgcatgctgctgggcaagatatccgactgcaagaacgcgttggtttcctgg
aaagaccagctgaaaaaagcgaactgcgattacaccccgggacagcgtggataccaggtg
agcgccggcgacgtcgacgaactggtcgccgtcgtctacgccgaataccagcatcgtctg
gcgctcgccaacgcagtcgacttcgacgatttgatcatgcgcaccgtggaattgctccaa
acctgcccgcaggtgagcgaatactatcggcacaggttccgttacatcttcgtggacgag
tatcaagacaccaaccatgcccaatatgtgctcgtacgtgaattgtccggcatcgattcg
gacgaacagcccgacccgcaggcgaggggagcgggccgtgtgggaccgagctggattacc
gtggtgggtgattccgaccaatccatctacgcgttccgaggtgcggacatccgtaacatc
caagatttcgaacaggatttcccgaacgccaaaaccatcatgctcgaacagaactaccgt
tcgacgcagaccatcctcgacgcggcgaacgcggtgatcgcgaaaaacgaaaaccgcaag
ccgaagaaactgtggacggcgcttggtcaaggcgacaaaatcgtcggctatgccgccgac
aacgcacagcaggaagccggatggatagcgaacgaaatcgcacgaatccacaccgaggaa
gacgtcgcttaccgtgacatcgccatcatgtaccgagccaacgcgcagtcacgttcgctg
gaagaggccatgatcaacgccaatctgccgtatcagctggtcggcggcaccaaattctat
gaacgtagggaagtcaaggacgccatcgcgtatttgcaggccatcgtgaatcccgcggat
aatgtgaacgtgcggcgtatcctcaatgtgcctaaacgaggactcggcgcacgcgcggag
ggattggtggccggctacgcggacgcgcatggcctcacgttcttcgaatccattgaacat
atggaccagattgaaggcatgacaggccgtaccaccaaaccgttgggcgcattccgtgat
ctgatgcacgagctggccgatttcgccaaggaacatgattcgaaaccatccgaagtggtg
gccgaagtactggacaaaagcggtcttctggaggaattgcaacgttccgaggatccgcag
gatgcttcgcgtgtggacaatctttcccagttgcagtccgtggccgccgaattcgagcag
aacacgccggatgccacgttggccggtttcctggagactacggcattggtcgccgactcg
gatcagttgccgggagagggcgaggattccggcaaggtcacgatgatgaccttgcatacg
gcaaaaggtttggaatatccgtatgtgtttcttacgggtatggaacagggcacgttcccg
caccagcgtgccatggaggacaccagcgagctgtccgaggagcgtcgtctggcatacgtg
ggcatcacccgtgcgaagcgtcggctgtatgtgacccgtgcggcggtgcgtgcccaatgg
gggcaggccaatgacatgatgcccagccagttcctggatgagattccggatgaactcatc
gattggaaacgtcgtgaggccggtgtggagcgcatgcgcgccagctggggagatgacgac
gagttcggcgggtgggacgatgatgacgatttcggatccacttccttcggcggatcgatg
tacggatcgtcgacatacggttcctcatcgtatggttctggttctcgcggatcgcatccc
acttatgggtcgtctcatggatcgcacagctcgtatggttccggacggtcctcctacggc
tcgggaagccgccgtttctctggcggatcgcactctggctcgtcctcatacggttcgtat
ggctcatcccggtcgtcatacggctccggcaagccctccggcaaatccggtaaggtcacc
acgcgccgcgccaagccaaaggatctgacgaaatcggctccggcaagttcgttggacggc
aacaacggattgagcatttcggatttccagataggcgacagaatcacccatgaccattac
ggtttgggaaaggtcatcgaaacgcaggacaagggcgcgaattcggtgatcaccgtcgat
ttcggcacggatggcgtcaaacgattgctgcttcgtgtggcgcctattgaaaagctctga
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