Bifidobacterium adolescentis ATCC 15703: BAD_1011
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Entry
BAD_1011 CDS
T00437
Symbol
hrdB
Name
(GenBank) RNA polymerase principal sigma factor; sigma 70
KO
K03086
RNA polymerase primary sigma factor
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BAD_1011 (hrdB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bad03021
]
BAD_1011 (hrdB)
Transcription machinery [BR:
bad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAD_1011 (hrdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DprA_WH
CDC27
Motif
Other DBs
NCBI-ProteinID:
BAF39792
UniProt:
A1A259
LinkDB
All DBs
Position
complement(1256430..1257869)
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AA seq
479 aa
AA seq
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MVYASGGINRRISLATKETTVNTEQTDLTEKTTSGKKASTRKPAAKKSESSKTATKTSRK
TAAKKTSAAKKSKKAEEEEENLIEQDAPEDDPVEDADLDDFDDDLDDVDDEGEDDDLDED
NIDEDDDSELEDDDEDKRKKPEEPKEKGAFVVRDDDDDDNLTPSGNPKRRVIAAGATADP
VKDYLKQIGRVNLLNAEQEVDLSERIEAGLYAQHLLDTESDKMDFKRRRELKWAANDGKR
AKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWW
IRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKV
QEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPR
EAGVIKMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggtatacgcttccggcgggatcaataggaggataagtttggccaccaaggaaacgacg
gtaaatacggaacagactgatctgaccgaaaagaccacctccggaaaaaaggcctccacg
cgcaagcctgctgccaagaagagcgagtcctcaaagaccgctacgaagacgtcgcgcaag
acggccgcgaagaagacctccgccgccaagaaaagcaagaaagcggaagaagaagaagag
aacctgatcgagcaggacgctcctgaagacgatcccgtcgaggatgccgatcttgatgat
ttcgacgatgaccttgatgacgtggacgacgaaggggaggatgacgacctcgacgaggac
aatatcgacgaggatgacgattccgaactggaagacgatgacgaagacaagcgcaaaaag
ccggaagagcccaaggaaaaaggcgctttcgtggtgcgtgacgatgatgacgacgacaat
ctgacgccgtccggcaatccgaagcgtcgtgtgatcgcagccggcgccaccgcagatccg
gtcaaggattacctgaagcagataggccgagtgaacctgctgaacgccgaacaggaagtc
gacctgtccgaacgcatcgaggccggtctgtacgcccaacatctgctggacacggaatcc
gacaagatggatttcaagcgccggcgtgaactgaagtgggccgcgaacgacggcaagcgc
gccaaggaccatctgctggaagccaaccttcgactcgtggtctctcttgccaagcgctat
acgggccgtggcatgctgttcctcgatttgattcaggaaggcaatcttggtctgattcgt
gccgtagagaagttcgactggaagaagggcttcaagttctccacgtacgccacatggtgg
attcgccaggccatcacccgtgccatggctgatcaggcccgcaccattcgtgtgcctgtg
catatggtggaagtcatcaacaagctgtcccgcgtgcagcgccagatgcttcaggacctc
ggccgcgaacctacgccggacgaactagcccgcgagctcgacatgccggtcgagaaggtg
caggaagtgcagaagtacgggcgtgagccgatttccctgcacacgccgctgggcgaggat
ggcgattccgagttcggtgatctgatcgaagacaccgacgccatcgcaccgtccgatgcc
gtcgccttctcgctgttgcaggagcagttcaagcaggtgcttgaaacgctgtctccgcgt
gaagctggcgtcatcaagatgcgctacggtttggaggacggccagccgaagacgctggat
gatatcggacgtgtgtatggcgtgacgcgcgaacgtatccgccaaatcgaatcgaagacc
atgtccaagctgcgccatccgtcccgttcgcagacgctgcgcgacttcctggaccagtga
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