Bifidobacterium adolescentis ATCC 15703: BAD_1130
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Entry
BAD_1130 CDS
T00437
Symbol
dnaE1
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Pathway
bad03030
DNA replication
bad03430
Mismatch repair
bad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAD_1130 (dnaE1)
03430 Mismatch repair
BAD_1130 (dnaE1)
03440 Homologous recombination
BAD_1130 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bad03032
]
BAD_1130 (dnaE1)
03400 DNA repair and recombination proteins [BR:
bad03400
]
BAD_1130 (dnaE1)
Enzymes [BR:
bad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAD_1130 (dnaE1)
DNA replication proteins [BR:
bad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAD_1130 (dnaE1)
DNA repair and recombination proteins [BR:
bad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAD_1130 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
DUF655
DUF5487
Motif
Other DBs
NCBI-ProteinID:
BAF39911
UniProt:
A1A2H8
LinkDB
All DBs
Position
complement(1399454..1403044)
Genome browser
AA seq
1196 aa
AA seq
DB search
MATSANFVQLHNHTHYSLLDGASKIPDLVKRAKELGMPAVGITDHGNMHGAYEMWSAAVN
AGIKPIIGIEAYVTPETARQDPTRVSWDTNWNPDLDPLHRRRNPDDVSGGGVITHLTMWA
ENDEGLVNLMKASTDANLEGRVMRYPRMDKEILAKYSKGIIASSGCPSGIIQTRLRLGQF
DDALRAAGEFQDIFGRDNFYIEFMDHGLKIEKQVTDGLLDIAKKLNAPLLATNDSHYTRA
EDAGAQDAMLCINSGSTLDEPGRFKFDGTGYYIKSAEEMRELFKDLPEACDNTLEIAERC
NVMFDDHEDGAFMPQFDCPEGWDETSLFLKKVEEGLERRYNGKPSLEVLRQADYECGVIC
QMQFCGYFLVVADYINWAKAHGVMVGPGRGSAAGAMVAYAMGITELDPLEHGLIFERFLN
PERVSLPDIDVDFDPDGRGRVLDYVGEKYGRDKVAQCVIYGTIKTKQALKDSARIMGYDF
SVGDKITKALPPAQTGGKDIPLHDIFDPSAKRYAEAREFRELYDSDPDTKRITDEAMGIE
GLIRQTGVHACATIMGSEPITNTSPLLERTDGTVTTTLEYHTCETLGLVKMDFLGLSNLT
VIRDTLNNIEANGKERIDHTKIPLDDRPTYDLLSRGDTLGVFQLDSDGMRSLLKTLKPNN
FNDISALIALYRPGPMDMDSHTNYAKRKNGLQKITPIHPEVAEPLKEVLDETYGLIVYQE
QVQSAARILAGYSLGKADVLRRAMGKKKPEVLAKEKIPFFAGMKEHGYSEEAAQAVWDIL
VPFSGYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGASTNKDKTALYLGEARRMG
IQVLSPDVNESVYEYSAVGDVVRFGLGAIRNVGKNAVDAIIAERENGHGKYVNFTDFIKR
VPLEALNRRLVESLIKAGAFDSIDPNRRALFTIHETAINSVVGLKRKQAEGQFDLFADLD
DSKENDSAMGDAMVQVPDVEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILVSLREMSIA
HLIDRAGSMPDGQQVTIAGLITNVDRRVSKKGNPWAIVTVEDLESSIQCMFFGKVYEAAA
PELAVDTVVQIRGQVEKRDETVSMRATEFTVPTLEAQDERPLTIVLPPIALDQSHVRRLG
QILTSHPGPCEVKLALMDDKGNAKVLTFGDRFRVKRDTSLFAEIKILFGPSSLPLA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggctacttccgcaaatttcgtgcaactgcataatcacacgcattattcgctgctcgac
ggcgcatcgaaaataccggatctggtcaagcgcgccaaggaactgggcatgccggccgtc
ggcatcaccgaccacggcaacatgcatggcgcgtatgagatgtggagcgccgcggtcaac
gccggcatcaagccgatcatcggcatcgaagcctatgtgacgccggaaaccgcacgtcag
gaccccacccgtgtgagctgggacaccaactggaatccggatctggatccgctgcatcgc
cgccgtaacccggatgatgtgtccggcggcggtgtcatcacccacctgaccatgtgggca
gaaaacgacgaaggcctcgtcaacctcatgaaagcctccaccgacgcgaaccttgaaggc
cgagtcatgcgctatccgcgtatggataaggaaatcctcgccaaatattcgaaaggcatc
atcgcctcgtccggctgcccgtcgggcatcatccagactcgtctgcgcctgggccagttc
gatgacgcgttgcgtgccgccggcgaattccaagacattttcggccgcgataatttctac
atcgaattcatggaccacggcctgaaaatcgaaaagcaagtgaccgacgggctgctcgac
atcgcaaaaaagctcaacgcgccgctgctggccaccaacgattcccattacacgcgtgcc
gaagacgccggcgcgcaggacgccatgctgtgcatcaactccggctccacgctggacgag
ccgggccgattcaaattcgacggcaccggctactacatcaaatccgccgaggaaatgcgc
gaactgttcaaagaccttcccgaagcgtgcgacaacacgttggagatcgccgaacgctgc
aacgtcatgtttgacgatcatgaagacggcgcgttcatgccgcaattcgactgtccggaa
ggctgggacgagacgtcgctgttcctgaagaaggtcgaggaaggcctggaacgccggtac
aacggcaagccgtcgctcgaagtgctgcggcaggccgactacgaatgcggcgtgatctgc
cagatgcagttctgcggctacttcctcgtcgtggccgactacatcaactgggcgaaggcc
cacggcgtgatggtggggccgggccgtggctccgccgcaggcgccatggtcgcgtatgcg
atgggcatcaccgaacttgatccgcttgaacatggtctgatcttcgaacgattcctcaat
ccggaacgtgtctcactgcctgatatcgacgtcgacttcgacccggacggtcgtggacgc
gtgctcgactacgtgggtgagaaatacggacgtgacaaagtggcgcagtgcgtgatctac
ggcaccatcaaaaccaagcaggcgctgaaggactccgcccgcatcatgggatacgacttc
tccgtcggagacaagatcaccaaagccctgcctcccgcacagaccggcggcaaggacatt
ccgctgcacgacatcttcgacccaagcgcgaaacgatacgcggaagcacgcgaattccgc
gaactgtacgattccgacccggacacgaaacgcatcacggacgaggcgatgggcatcgaa
ggtctgattcgtcagaccggtgtgcacgcctgcgccaccatcatgggcagcgagccgatc
accaacacgtcgccgctgctggaacgtaccgacggcaccgtcaccaccacgctcgaatac
catacgtgcgaaacgctcggtctggtcaagatggacttcctcggactttccaacttgacg
gtgattcgagacaccctgaacaacatcgaggcgaacggcaaggaacgcatcgaccatacg
aagattccgctggacgaccgccccacctacgacctgctgtcccgtggcgacacgctcggc
gtgttccagctcgattccgacggcatgcgctcgctgctgaaaacgttgaagccgaacaac
ttcaacgatatttccgcactgatcgcgctgtaccgtccaggtccgatggatatggattcg
cacaccaactatgcgaagcgcaagaacggtctgcagaagatcacgccaatccaccccgaa
gtggccgaaccgcttaaggaagtgctcgacgagacctacggtctgatcgtctaccaggag
caggtgcagtccgcggcgcgaatcctcgccggctattcgctgggcaaggcagacgtgctg
cgtcgagcgatgggcaagaagaagccggaagtgctggccaaggagaagattccgttcttc
gccggcatgaaggagcatggatattccgaagaggccgcgcaggccgtgtgggacatcctc
gtgccgttctccggctacgcgttcaacaaggcgcattcggccgcatacggtttgatctcc
tactggaccgcgtatctgaaaacgcattatccggtggagttcatggccgccctgctgcaa
ggcgccagcacgaacaaagacaagaccgcgctgtacctgggcgaggcgcgacgcatgggc
atccaggtgctttctccggacgtgaacgagtcggtgtacgagtattcggcagtcggcgac
gtcgtgcgattcggcctcggcgccatccgcaacgtcggcaagaacgcggtcgatgcgatc
atcgcggaacgtgagaacggccacggcaagtacgtgaacttcaccgatttcatcaaacgc
gtgccgttggaggcgctgaacaggcgattggtggaatcgctgatcaaggccggcgcgttc
gactcgatcgacccgaaccgtcgtgcgctgttcaccatccacgaaacggccatcaattcg
gtcgtcggcctgaaacgcaagcaggcggaaggccagttcgacctgttcgccgacctggac
gattccaaagagaacgattccgccatgggagacgccatggtgcaggtgcccgacgtggag
gagtgggacaagaaaaccaagctcaacttcgaacgtgagatgcttggcctgtacgtgtcc
gaccatccgttgagcggcatgcagtcgattctggtgtcgttgcgcgaaatgtcgatagcg
cacctgatcgaccgcgcgggaagcatgccggacggccagcaggtgacgatcgcgggcctg
atcacgaatgtggaccgccgcgtgtcgaaaaagggcaatccgtgggccatcgtaaccgtc
gaggatttggaaagttccatccaatgcatgttcttcggcaaggtgtacgaggccgccgcg
cccgagctcgccgtcgacaccgtggtacagatccgcggccaggtggagaagcgcgatgag
acagtgagcatgcgcgccaccgaattcaccgtgccgacgttggaggcgcaggatgaacgt
ccgctgacgattgtgctgccgccgatcgcgctcgaccagtcgcatgtgcggcggctcggg
cagattctgaccagccatcccggcccatgcgaggtgaaactggcgttgatggacgacaaa
ggcaacgccaaggtgctgacgttcggagaccggttccgcgtcaaacgcgacacgtcgctg
ttcgccgaaatcaagattctcttcggaccgagctcgcttccgttggcctga
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integrated database retrieval system
