Bifidobacterium adolescentis ATCC 15703: BAD_1163
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Entry
BAD_1163 CDS
T00437
Name
(GenBank) probable DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Pathway
bad03420
Nucleotide excision repair
bad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAD_1163
03430 Mismatch repair
BAD_1163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bad03400
]
BAD_1163
Enzymes [BR:
bad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAD_1163
DNA repair and recombination proteins [BR:
bad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAD_1163
MMR (mismatch excision repair)
Other MMR factors
BAD_1163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BAF39944
UniProt:
A1A2L1
LinkDB
All DBs
Position
complement(1439301..1440800)
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AA seq
499 aa
AA seq
DB search
MDATAEAILDGLDDAQRMAATAVRGPVRIIAGAGAGKTRTVTRRIAYACAIKAWDPHATL
AVTFSVKAAAEMRNRLSQLDVASDVKAATFHSAALHQLRRIWPDVCEGPMPFISRNPREI
VEHSLRRVTTQQVDDDTVRNLQAEINWCKISLIAPEDYERVCAAIHHQPPAGLEPSQFVD
VYKAYETEKTNRNEIDFDDILLITCHLIESDEDVAASIRSGITWLTVDEYQDVSPLQHRL
LTRWLGDNRNICVVGDPAQTIYSFAGASSYNLLNFASEFGPLTADVRLNNDYRSTPQIVN
YANRVLEASPQRADYLKLNSKRDQGRRVAQTVYNSDLEEARGVAARIRRLVDEGASPGDC
AILTRVNAQQKILCRALGEQHLRYRVKRDSGWQNSALADDAQTRLAMLEALGAGGDVKGV
TISTIHASKGLEFKHVFLIGCSEGLIPYGSPPEGDLLEEERRLMYVAVTRAEDTLDVSYA
RAREDDGSDRGRRKSRFFR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaacagcggaagcgattctcgacggactggacgatgcgcagcgcatggcggcg
accgccgtgcgcggtcccgtccgtatcatcgccggcgcaggtgccggcaaaacgcggacc
gtcacccgaagaatcgcctacgcatgcgccatcaaggcatgggatccgcacgccacgctc
gccgtgaccttctccgtcaaagcggccgcggaaatgcgcaacagactatcccaactcgac
gtcgcatccgacgtcaaagccgccaccttccactccgcggcactacaccaactccgtcgg
atctggccagacgtatgcgaagggcccatgccgttcatctcacgcaatccgcgcgaaatc
gtggaacattccctacgccgagtcaccacccagcaggtggacgacgacaccgtgcgcaac
ctgcaagccgaaatcaactggtgcaaaatctcgctcatcgcgccggaagactatgaacgc
gtctgcgcggccatccaccaccagccgccggcaggactggaaccaagccaattcgtggat
gtctacaaagcctacgaaaccgaaaaaaccaatcgcaacgaaatcgacttcgacgacatc
ctgctcatcacctgccacctcatcgaaagcgacgaagacgtggcggccagcatccgctcc
ggcatcacatggctcaccgtcgacgaataccaagacgtctcgcccctgcagcatcggctg
ctcacccgatggctcggtgacaaccgcaacatctgcgtggtcggcgacccggcacagacc
atctactcgttcgccggagccagcagctacaacctgctcaacttcgcctccgaattcggc
cccctcaccgccgacgtcagactcaacaacgactaccgttccacaccgcagatcgtcaac
tacgccaaccgcgtgctcgaagcctcaccgcaacgcgccgactatctcaaactcaactcc
aagcgagaccaaggccgccgagtcgcgcaaaccgtctacaacagcgatctcgaagaagcc
cggggcgtggctgcacgcatccgcagactcgtggacgagggagcatctccgggcgactgc
gccatcctcacccgagtcaacgcgcagcagaaaatcctctgccgggcactgggcgaacaa
cacctgcgctaccgcgtcaaacgagacagcggatggcagaactccgcgctcgcggatgac
gctcagacccgcttggccatgttggaagcacttggcgcaggcggcgacgttaaaggcgtg
accatctccaccatccatgcctccaagggcctggaattcaaacacgtgttcctgatcggg
tgctccgaagggctgattccatacggttcaccgcccgaaggcgaccttctggaagaggaa
cggcgattgatgtacgtggcggtcacgcgtgccgaagacacactcgacgtgtcctatgcg
cgcgcccgcgaagacgatgggtccgatcgcgggcgcaggaaatcacgcttcttccggtga
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