Bifidobacterium adolescentis ATCC 15703: BAD_1217
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Entry
BAD_1217 CDS
T00437
Symbol
xseA
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Pathway
bad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BAD_1217 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bad03400
]
BAD_1217 (xseA)
Enzymes [BR:
bad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BAD_1217 (xseA)
DNA repair and recombination proteins [BR:
bad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BAD_1217 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
THF_DHG_CYH
Motif
Other DBs
NCBI-ProteinID:
BAF39998
UniProt:
A1A2R5
LinkDB
All DBs
Position
1520703..1521983
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AA seq
426 aa
AA seq
DB search
MTWNPDYNPPTAQRTSKPLPRLASETTADNPWPVSLLSEKFYTAVERWPSVWVAGQITQI
NTRRQGSAYITLRDDQQDIAMEVNGFGRFAAAAAPFVQGDRVIIHGKPNVWMKRTSLSLR
GDAIIAAGAGGSLKAMIDELRKKLKGEGLFDADRKKPLPEFPHCIGLICAPQARAEGDVI
TNVRLRWPVVGFKVTHVHVQGEQCPSDVVAAIRQLDADPDVDVIIVARGGGAFEDLIGFS
DENVVRAAAAAHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVHEQMQLIQVN
LDRMRVRIDATVSNETRLIEGYANRPSLTQPLTMLEPHQRFLDDARTRMRIGLTRILDDA
SLTIEKAHASLTALSPQSTLDRGYAVVQCADGHVLDDADKVKTGDQLTMTLKHGIVVSEV
KTVTKE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacttggaacccggattacaacccaccgacggcgcagcggacgtcgaagccgctgccc
cgtctggcgtcggaaaccaccgccgacaatccttggccggtgagcctgctcagcgagaag
ttctacacggcggtcgaacgttggccctccgtatgggtggccgggcagatcacgcagatc
aacacgcgtcgtcagggaagcgcctacatcacgcttcgcgacgaccagcaggacatcgct
atggaagtcaacggcttcggacggttcgccgcggcggcggcgccgtttgtgcagggcgac
cgtgtcatcatccacggcaagccgaacgtgtggatgaagcgcacgtcgctgtcgttgcgc
ggcgacgcgatcatcgcggccggcgcgggcggcagcctgaaggccatgatcgacgagcta
cgcaagaagcttaagggagaaggtctgttcgacgccgatcgcaagaagccgttgccagaa
tttccgcattgcatcggcttgatctgcgcgccgcaggcacgtgcggaaggcgacgtcatc
accaacgtgcgtctgcgttggcccgtcgtcggcttcaaggtgacgcatgtgcacgtgcag
ggcgagcagtgcccgtcggacgtggtggcggccatccggcagctggatgccgatccagat
gtggatgtgatcatcgtggcgcgtggcggcggcgctttcgaagatctgattggcttttcc
gatgagaacgtggtgcgcgccgcggcggcggcccacactcccctgatttccgccatcggg
catgaggacgattggaccctgctggatttggtggccgacctcagggcctccacgccgacc
gacgcagcgaagaaggtcgtgccggacgtgcatgagcagatgcagctgattcaggtgaac
ctggaccgcatgcgcgtgcgcatcgacgccaccgtctccaacgagaccaggcttatcgaa
ggctacgcgaaccgtccaagcctcacccagccgctcaccatgttggaaccgcatcagcgt
ttccttgatgacgcacgcacaagaatgcggatcggtctgacccgtattcttgacgacgcg
agcctgaccatcgagaaagcgcacgcgtcgctgaccgcgctgagtccgcaatccacgctt
gaccgcgggtacgcggtggtgcaatgcgccgacgggcatgtgcttgacgacgcggacaag
gtgaagacgggcgaccagctgaccatgaccttgaagcacggcatcgtcgtgtctgaagtg
aaaaccgtaacgaaggagtag
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