Bifidobacterium adolescentis ATCC 15703: BAD_1417
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Entry
BAD_1417 CDS
T00437
Symbol
lysA
Name
(GenBank) probable diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Pathway
bad00300
Lysine biosynthesis
bad00470
D-Amino acid metabolism
bad01100
Metabolic pathways
bad01110
Biosynthesis of secondary metabolites
bad01120
Microbial metabolism in diverse environments
bad01230
Biosynthesis of amino acids
Module
bad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BAD_1417 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BAD_1417 (lysA)
Enzymes [BR:
bad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BAD_1417 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAF40198
UniProt:
A1A3B5
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All DBs
Position
complement(1790474..1792048)
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AA seq
524 aa
AA seq
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MPVSPIWPAGSAVNDEGEITFHGRTAASLLDEFGSPLYVIDTDDVRARATKFVHAASHAF
NNTVTHVSFAGKALLSKEICRIVTESGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
AEIELAIEQGFNKIVVDEPGEPERIATIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHED
QKFGVALLPAGADAGKLGVLDDLTDVTPAGSNARLGEHASEVHAQRELQYDIKYPYDLSH
EKVSEGDRKLAEAMTMVADGPALAVLKDIYRRQDVLELVGVHSHIGSNIHDADAFIQAAK
RMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDIDVELGRLADAVSTVNRALGMP
SPVISFEPGRWTVAPTGVTLYRVGTVKPVELSGEAKDKSGNPVTERVYVSVDGGMSDNIR
PALYGSDYTARLANRKGSEQTKLCRVVGMHCESGDIVVNEVRLPADIKRGDILAVPVTGA
YGRTMASNYNQALIPAVVGVGEAGAHVMIRRQTIDDLLSWDVSE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaagcccaatctggccggccggctcggccgtgaacgacgaaggcgagatcacc
ttccacggtcgtaccgccgcaagcctgctcgacgaattcggttcgccgctctacgtcatc
gacaccgatgacgtgcgcgcccgcgccacgaaattcgtgcatgccgcgtcccacgcgttc
aacaacaccgtcacccacgtcagcttcgccggcaaagcgctgctgagcaaggaaatctgc
cgcatcgtcaccgaatccggcatgctcatcgacacctgcaccatgggtgagatgcgcatc
gcgctcgccgcgggcgtcccaggccgccgcctcgtgctgcacggcaacaacaagtccgat
gcggaaatcgagctggccatcgaacagggcttcaacaagatcgtcgtggacgagccgggc
gagccggagcgtatcgccaccatcgccaagcgtctcggcaagcgcgcacgcgtcatgctg
cgagtcacgtccggcatccacgcgggtggccacgaattcgtgtccaccgcgcacgaggac
cagaaattcggcgtggccctgctgcccgccggagccgacgcgggcaaactcggcgtgctc
gacgacctcaccgacgtgacgcccgccggctcgaatgcacgacttggcgaacacgcctcc
gaagtccatgcgcaacgcgagctgcagtacgacatcaaatacccgtacgatttgagccac
gagaaggtctccgaaggcgaccgcaagctcgccgaagccatgaccatggtggccgacgga
ccggcgctcgccgtgctcaaggacatctaccgccgtcaggacgtgctcgaactggtcggc
gtgcactcgcacatcggctccaacatccatgacgcggacgccttcatccaggcggccaag
cgcatgatgctgctgcgcaagaccttctacgccaccgatgcgtacaccctgccggaggtc
gatctgggcggcggttattccgtggcctacaccgacggcgaggattccatggacatcgac
gtggagctcggcaggctcgccgacgcggtcagcaccgtgaaccgcgcgctcggcatgccg
tccccggtcatctccttcgagccaggccgctggacggtggcccccaccggcgtcacgctg
taccgcgtgggcaccgtcaagccggtcgagctttccggcgaggcgaaagacaagtcaggc
aatccggtgacggaacgtgtgtacgtgtccgtggatggcggcatgagcgacaacattcgt
ccggcgctgtacggctccgactacaccgcgcgtctggccaaccgcaagggaagcgagcag
accaagctgtgccgcgtggtcggcatgcactgcgaatcgggagatatcgtcgtcaacgag
gtgcggctgcccgccgacatcaagcgtggcgacatcctcgcggtgccggtcaccggcgca
tacggccgcacgatggccagcaactacaaccaggcgctgattcccgccgtggtcggcgtc
ggcgaggccggcgcacacgtcatgatccgccggcagacgatcgacgatctgctgagctgg
gacgtcagcgaatag
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