Bifidobacterium adolescentis 22L: BADO_0738
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Entry
BADO_0738 CDS
T03260
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
badl
Bifidobacterium adolescentis 22L
Pathway
badl03420
Nucleotide excision repair
badl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
badl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BADO_0738
03430 Mismatch repair
BADO_0738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
badl03400
]
BADO_0738
Enzymes [BR:
badl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BADO_0738
DNA repair and recombination proteins [BR:
badl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BADO_0738
MMR (mismatch excision repair)
Other MMR factors
BADO_0738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
CarD_TRCF_RID
AAA_22
DUF2474
Herpes_UL42
Motif
Other DBs
NCBI-ProteinID:
AII76159
UniProt:
A0A076JMA2
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All DBs
Position
926982..929621
Genome browser
AA seq
879 aa
AA seq
DB search
MGPVMCDPRSLIEGLNPQQEEAVKYYGQALLIGAGAGSGKTRVLTRRIAWLLAHGFWASS
ILAITFTNKAAAEMRERLVTLVGPEAEHMWISTFHSACVRILRRDGKEIGLKSGFSIYDT
ADSERLVKLIAADLNIDTKRYTPRMLLGKISDCKNALVFWKDQLKKANCDYTPGQRGYQV
SAGDVDELVAVVYAEYQHRLALANAVDFDDLIMRTVELLQTCPQVSEYYRHRFRYIFVDE
YQDTNHAQYVLVRELSGIDSDEQPDPQARGAGRVGPSWITVVGDSDQSIYAFRGADIRNI
QDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIAKNENRKPKKLWTALGQGDKIVGYAAD
NAQQEAGWIANEIARIHTEEDVAYRDIAIMYRANAQSRSLEEAMINANLPYQLVGGTKFY
ERREVKDAIAYLQAIVNPADNVNVRRILNVPKRGLGARAEGLVAGYADAHGLTFFESIEH
MDQIEGMTGRTTKPLGAFRDLMHELADFAKEHDSKPSEVVAEVLDKSGLLEELQRSEDPQ
DASRVDNLSQLQSVAAEFEQNTPDATLAGFLETTALVADSDQLPGEGEDSGKVTMMTLHT
AKGLEYPYVFLTGMEQGTFPHQRAMEDTSELSEERRLAYVGITRAKRRLYVTRAAVRAQW
GQANDMMPSQFLDEIPDELIDWKRREAGVERMRASWGDDDEFGGWDDDDDFGSTSFGESM
YGSSTYGSSSYGSGSRGSHSTYGSSHGSHSSYGSGRSSYGSGSRRFSGGLHSGSSSYGSY
GSSRSSYGSGKPSGKSGKVTTRRAKPKDLTKSAPASSLDGNNGLSISDFQIGDRITHDHY
GLGKVIETQDKGANSVITVDFGTDGVKRLLLRVAPIEKL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggacctgtgatgtgcgatccgcggagcctgatagagggactcaacccccaacaggaa
gaagcggtgaaatactacggccaggcattgctcatcggcgccggcgcaggctcaggcaag
acccgtgtgctgacacgtcgcatcgcatggctgctggcgcatggcttctgggcaagcagc
atcctcgccatcaccttcaccaacaaggcggccgcggaaatgcgtgaacgtctcgtgact
ttggtcgggccggaagccgaacatatgtggatctccaccttccactccgcctgcgtacgc
atcctacgccgcgacggcaaggaaatcggccttaaatcgggcttctcgatttacgacacc
gcggacagcgagcgactggtcaaactgatcgcagccgacctgaacatcgatacgaagcgg
tatacgccacgcatgctgctgggcaagatatccgactgcaagaacgcgttggttttctgg
aaagaccagctgaaaaaagcgaactgcgattacaccccgggacagcgcggataccaggtg
agcgccggcgacgtcgacgaactggtcgccgtcgtctacgccgaataccagcatcgtctg
gcgctcgccaacgcagtcgacttcgacgatttgatcatgcgcaccgtggaattgctccaa
acctgcccgcaggtgagcgaatactatcggcacaggttccgttacatcttcgtggacgag
tatcaagacaccaaccatgcccaatatgtgctcgtacgtgaattgtccggcatcgattcg
gacgaacagcccgacccgcaggcgaggggagcgggccgtgtgggaccgagctggattacc
gtggtgggtgattccgaccaatccatctacgcgttccgaggtgcggacatccgtaacatc
caagacttcgaacaggatttcccgaacgccaaaaccatcatgctcgaacagaactaccgt
tcgacgcagaccatcctcgacgcggcgaacgcggtgatcgcgaaaaacgaaaaccgcaag
ccgaagaaactgtggacggcgcttggtcaaggcgacaaaatcgtcggctatgccgccgac
aacgcacagcaggaagccggatggatagcgaacgaaatcgcacgaatccacaccgaggaa
gacgtcgcttaccgtgacatcgccatcatgtaccgagccaacgcgcagtcacgttcgctg
gaagaggccatgatcaacgccaatctgccgtatcagctggtcggcggcaccaaattctat
gaacgtagggaagtcaaggacgccatcgcgtatttgcaggccatcgtgaatcccgcggat
aatgtgaacgtgcggcgtatcctcaatgtgcctaaacgaggactcggcgcacgcgcggag
ggattggtggccggctacgcggacgcgcatggcctcacgttcttcgaatccattgaacat
atggaccagattgaaggcatgacaggccgtaccaccaaaccgttgggcgcattccgtgat
ctgatgcacgagctggccgatttcgccaaggaacatgattcgaaaccatccgaagtggtg
gccgaagtattggataaaagcggtcttctggaggaattgcaacgttccgaggatccgcag
gatgcttcgcgtgtggacaatctttcccagttgcagtccgtggccgccgaattcgaacag
aacacgccggatgccacgttggccggttttctggagaccacggcattggtcgccgactcg
gatcagttgccgggagagggcgaggattccggcaaggtcacgatgatgaccttgcatacg
gccaaaggtttggaatatccgtatgtgtttcttacgggtatggaacagggtacgttcccg
caccagcgtgccatggaggacaccagcgagctgtccgaggagcgtcgtctggcatacgtg
ggcatcacccgtgcgaagcgtcggctatatgtgacccgtgcggcggtgcgtgcccaatgg
gggcaggccaatgacatgatgcccagccagttcctggatgagattccggatgaactcatc
gattggaaacgtcgtgaggccggtgtggagcgcatgcgcgccagctggggagatgacgac
gagttcggcgggtgggacgatgatgacgatttcggatccacttccttcggcgaatcgatg
tacggatcgtcgacatacggttcctcatcgtatggttctggttctcgcggatcgcattcc
acttatgggtcgtctcatggatcgcacagctcgtatggttccggacggtcctcctacggc
tcgggaagccgccgtttctctggcggattgcactctggctcgtcctcatacggttcgtat
ggctcatcccggtcgtcatacggttccggcaagccctccggcaaatccggtaaggtcacc
acgcgccgcgccaagccaaaggatctgacgaaatcggctccggcaagttcgttggacggc
aacaacggattgagcatctcggatttccagataggcgacagaatcacccatgaccattac
ggtttgggaaaggtcatcgaaacgcaggacaagggcgcgaattcggtgatcaccgtcgat
ttcggcacggatggcgtcaaacgattgctgcttcgtgtggcgcctattgaaaagctctga
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