KEGG   Bifidobacterium adolescentis 22L: BADO_1060
Entry
BADO_1060         CDS       T03260                                 
Name
(GenBank) ATP-dependent helicase II
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
badl  Bifidobacterium adolescentis 22L
Brite
KEGG Orthology (KO) [BR:badl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:badl03400]
    BADO_1060
Enzymes [BR:badl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BADO_1060
    5.6.2.6  RNA 3'-5' helicase
     BADO_1060
DNA repair and recombination proteins [BR:badl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BADO_1060
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C ResIII Cas3-like_C_2 PhoH DUF6406
Other DBs
NCBI-ProteinID: AII76475
LinkDB
Position
complement(1304578..1309455)
AA seq 1625 aa
MMSEGDAIIERMYECMDLFSEATNAWFKHAFNAPTEAQRLAWPAIRSGENVLVVAPTGSG
KTLCAFLSAIDRLMTKEGDDLLRTSGGGDGTAESDCNAKKRKPVRGVKVLYISPLKALGV
DVAKNLQAPLAGIAGQCEAMGLPSPKVSVGIRSGDTTPQERRRIVSHPPDILVTTPESLF
LLLTSKARRILSAVDTVIVDEVHAIAGSKRGAHLALSLERLESLAGRSVQRIGLSATVEP
PAEAARFLGGTRPVRVIRPESHPDMDLKVVEPLSAMRDPVSDDAGRRAGAVKLPNRHTTH
ISGVGPAMEALAERKGLTSVGGDEHTSRVSTGGSVWPAIERSVLDEVLKHHTTLVFVNSR
GLAEKLTARLNDLYAQLRTSRKTGSETAVKADAGRDALSDRRLGRTDLSVSDNASQPEST
ASDSTQPYPDLGSPEGREGFAKHYDSVVGSTTMLVSSHADADAIAMAHHGSVSKDRRKQI
EEQLKRGQLRCVVATSSLELGIDMGSVDLVIQIAPPLSVSSGLQRVGRADHKVGGVSHAL
FYPITREQIIGTAASIECMRSGDIETLTIPCTPLDVLAQQTVAAAAMDDLKPDDWYVTVR
KAAPFEDLDRTMFDAVMGMMTGAYNGEDFSAFRPPLQYNEEAGLISARPGAQRLAVTSGG
TIPDRGTYTVVLPEEGSGPGPRKVGELDEEMVYESRVGDVITLGTSTWQIQEITRDRVVV
VPAPGRTARLPFWHGEGDGRDAAFGRSQGRFVRDMAQGLRAEVSDGIAGDKTSRFDTTTI
ARLRRDGLDGNAIGNLADLLAEQRAATGTIPNDRELVVERCQDEEGDWRVIVHSPYGRRV
HEPWAMAITTRIKQRYGFDGQVYAADDGIIIRLPDGDSNLPIRELLLFDTEELQRIIGTQ
VGESVLYAARFRECAARSLFLPRANPGRRVPLWQQRLRAAQLLNAARTRKNFPLLLETAR
ECLQDVYDLPALKHVMSGLRSGVISLSETVTETPSPFAENMLFGYVGAVMYQYDVPQAER
STQLLSMDPEVLERLLGATDMASLLDADVIAQVGKELAGRTFWNDLDETDIAGRVARYVK
THGPFTADQMIAELGLDAVQGVRMLDELHAKGELLKGHFVDDAAGADANGSDDSASERSP
RQTPQQWLHKDVFRRIRALSLAKARKAIKPVEPAVYQAFLLDRQGVGPVGGARYEGVDGL
MRVIEQLEGIYLNASVWESSVFPARVRDYQPSMLDELLASGDVVWVGSKINGSNAKEAGG
IAFHPADSRLLVKPGEQSQNNAYSAGTMTVPETILAALSNGGAFHARQLSTAAKVIWQEH
AEVNVNPETGEIILPAWGESQFEEALWSLVWQGKVTNSSFAPVRALTQGTVSVRAPRTAA
RRRVRIHASTPATLGGLWSAVDSSRTSPMAIPDQADDTAGKPTAGIEEYDIALIESLLDR
YGVIAAPLIDKEQVAGGFSGLYPVLKRMEEHGNLVRGMFVKGFGAVQFAGRDTVDALRGD
DEARSQSCVALDVTDPANLTGSAITWPEQHHMKPARRAESVIVLDHGMPVLFAVPKSHRI
VSFTDDERILQPACTELAYALQHQSKGSVSFAEMNGESLKERNEYRRLLHAAGFVDSPQG
MKLYG
NT seq 4878 nt   +upstreamnt  +downstreamnt
atgatgtctgaaggcgatgccataatcgaacgtatgtacgaatgcatggacttgttctcg
gaggctaccaatgcctggttcaagcatgcgttcaatgctccgacggaggcgcaacgtttg
gcatggccggccatccgctccggcgagaacgtgttggtggtggcgcccaccggctccggc
aagacattgtgcgccttcctttccgcaatcgaccgtctgatgacgaaggagggcgatgac
ttattgcggacgtccggcggtggggacggcacggctgaatccgattgcaatgccaagaaa
cgtaaacccgtccgcggcgtcaaggtcctgtatatttcgccattgaaggctctgggcgtg
gatgtggccaagaacctccaagcgccattggctggcatcgccggacagtgcgaggcgatg
ggattgccatcgccgaaagtcagcgtgggcatacgaagcggcgacaccacgccgcaggaa
cggcgcagaatcgtcagccatccgccggatatcctcgtaaccacgccagaatcgctgttc
ctgctgctcacctccaaggcgcgacggatactttccgccgttgataccgttatcgtggat
gaagtgcacgccatcgcgggctccaaacgtggcgcgcacctggcgctgagcttggaacga
ttggaaagccttgccggccggtctgtccaacgcatcgggctttccgccactgtggaaccg
ccggccgaagccgcacgtttccttggcggcacgcggccggtacgcgtcatcagacccgaa
tcgcaccccgacatggatctgaaagtggtggaaccgctttcggccatgcgcgatcccgtc
tccgacgacgcagggcggagggcaggcgccgtgaaacttccgaaccgccataccacgcat
atttccggggtgggtcctgccatggaggcattggcggaacgtaaaggactgacttcggtc
gggggagatgaacatacctcacgggtttcgaccggaggttcggtatggccggccatcgaa
cgcagcgtgcttgacgaagtgctgaaacaccacaccaccctcgtgttcgtcaactcccgt
ggccttgcggaaaaactcaccgcacggctcaacgacctgtatgcgcaattgcgcacatcc
cggaaaactgggtctgaaaccgccgtcaaagcggacgcagggcgggatgcgctgtccgac
cgtaggcttggccgaacggacttgagtgtgtcggacaacgcatcccagccggagtccaca
gccagtgattccacccagccgtatccggatctgggctccccggaaggccgtgaaggcttc
gccaaacactacgattccgtggtcggatccaccaccatgctggtctcctcgcatgcggac
gccgacgcgatcgccatggcgcatcatggttccgtttccaaagaccggcgcaaacagatc
gaagagcagctcaaacgcggccaattgcgttgcgtggtcgccacatcgagccttgaactc
ggcatcgacatgggttcagtggatctggtcatccagatcgcaccgccattgtccgtgtcc
tcgggattgcagcgggtggggcgcgccgaccacaaggtcgggggagtctcgcatgcactg
ttctacccgattacacgagagcaaatcatcggcacggccgcaagcatcgaatgcatgcgc
tccggagacatcgaaacactgaccattccatgcacccccttggacgtgcttgcccagcaa
accgtcgccgccgcggcgatggatgatctgaaaccagacgactggtacgtgaccgtgcgc
aaggccgcgccattcgaagatctcgacagaaccatgttcgatgctgtgatgggcatgatg
accggtgcctacaacggcgaggatttctccgccttccgacctccattgcaatacaacgaa
gaggcgggtctcatctccgcgcgccctggcgctcaacgactggccgtgaccagcggaggc
accatacccgaccgaggaacctacaccgtggtgcttcccgaagaaggctccggaccgggc
ccacgcaaagtgggggagctggatgaggaaatggtgtacgaatcccgggtcggagacgtc
atcaccctcggcacatcgacctggcagatccaggaaatcacccgggaccgtgtggtggtg
gttcctgctccagggcgtaccgcccgactgccgttctggcatggcgaaggcgacgggcgg
gacgcggcattcggacggtcccaaggccgattcgtacgcgatatggcgcaaggactacgc
gcggaagtctcggacggcatcgcaggagacaagaccagccgattcgacacgacaacaatc
gcacgtctacgtcgtgacggattggatggcaacgccatcggcaatcttgccgacctgctt
gccgaacagcgcgccgccacgggaacgattcccaacgaccgtgagctggtcgtcgaacgc
tgccaggatgaagaaggcgattggcgtgtgatcgtccactcgccatacggcagacgcgtg
cacgaaccatgggccatggccatcaccacacgtatcaaacaacgatacgggttcgatggg
caggtatacgcggccgacgacggcatcatcatccgcctcccggacggcgacagcaacctg
ccgatccgcgagctgctgctgttcgacacggaagagctgcaacgcatcatcggaacacaa
gtcggcgaaagcgtgctgtatgccgcacgattccgagaatgcgcggcgcgatcgctgttc
ctgccacgcgccaaccccggcagacgcgtccccttatggcagcagcggctgcgcgcggcg
caactgctcaacgccgcccgaactcggaagaacttcccgttgctgttggaaaccgcacgc
gaatgcctacaggacgtgtacgatctgcccgcgctgaaacatgtgatgtccggattacgc
tccggcgtcatctctttgagcgagaccgtcacggaaacgccgtcgccgttcgcggaaaac
atgctgttcggatacgtgggcgcggtcatgtaccaatacgacgtgccgcaagccgaacgc
agtacgcaactgctgtccatggacccggaagtgctggaacgtcttctgggagccacggac
atggcttcgctgttggatgccgacgtcatcgcgcaggttgggaaggagcttgccggacgg
acgttctggaacgatttggacgagaccgacattgccggccgtgtggcgcgatatgtcaaa
acgcatggcccattcaccgcggatcagatgatcgccgaactgggattggacgctgtccaa
ggcgtacgcatgttggatgaattacatgccaaaggcgaactgctgaaaggccatttcgtc
gatgatgcggccggagcggacgccaatggttccgatgattcagcatcggaacggtcacct
cggcaaacgccccagcaatggctccacaaagacgtgtttcggcgtatccgcgcgctttcg
cttgccaaggcacgcaaagccatcaagccggtggaaccggccgtctatcaggcgttcctg
ttggacagacaaggtgtcggacctgtgggtggcgcccgatatgaaggcgtcgacgggctg
atgcgtgtgattgaacagcttgaaggcatatacctcaacgcctccgtttgggaatcctcg
gtcttccccgcacgcgttcgcgactaccaaccgagtatgttggacgaactgctcgcatcc
ggagacgtggtatgggtcggctccaaaatcaatggttccaacgccaaggaagccggcggc
atcgcattccatccagctgattcacggctgctggtgaaacccggcgaacaatcgcagaac
aatgcctatagtgccggaaccatgaccgtgccggagacgatacttgccgcattatcgaat
gggggagccttccatgcgcggcagctttccacagccgccaaagtcatctggcaggaacat
gcggaagtcaacgtgaatcctgaaacaggggaaatcatccttcccgcatggggcgaaagc
cagttcgaggaagccttgtggtccttggtatggcaaggcaaagtgacgaacagttcattc
gctcccgttcgggccttgactcaaggcacggtttcagtgcgcgcgccacgcactgccgca
cgcagacgcgtacggatccacgcctcgacaccggcgacgctcggtggattatggtccgcg
gtcgactcgtcccggaccagtccaatggcgataccggatcaagcggacgataccgccggc
aaaccaacagccggcatcgaggaatacgacatcgcattgatcgaatcgctgctcgaccga
tatggcgtgatcgccgctccgctaatcgacaaggagcaggtcgcaggcggattctccgga
ctatacccggtactcaaacgtatggaggaacacggcaatctggtcagaggcatgttcgtc
aaaggattcggagcggtccaattcgctggacgtgacacagtggacgccttgcgcggcgac
gacgaggcgcgcagccaatcctgcgtggcgctcgacgtgaccgacccggccaacctgaca
ggctccgcgatcacatggcccgaacaacaccatatgaaaccggcgcgcagagcggaatcg
gtcatcgtgctcgaccacggcatgccggtgctgttcgccgtgccgaaaagccacagaatc
gtcagcttcaccgatgacgagcgaatattgcagccggcatgtacggaacttgcctatgca
ttgcagcatcagtccaagggcagcgtcagcttcgccgaaatgaacggtgaatcattgaag
gaacgcaacgaatacagacgtttgctgcatgctgccgggttcgtggacagcccacaaggc
atgaagctatatggctga

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