Bifidobacterium adolescentis BBMN23: BBMN23_0379
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Entry
BBMN23_0379 CDS
T03774
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bado
Bifidobacterium adolescentis BBMN23
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bado03016
]
BBMN23_0379
Enzymes [BR:
bado01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BBMN23_0379
Transfer RNA biogenesis [BR:
bado03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBMN23_0379
Prokaryotic type
BBMN23_0379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AJE05351
LinkDB
All DBs
Position
453794..454714
Genome browser
AA seq
306 aa
AA seq
DB search
MLNAVRLRIDLAYDGTGFYGWAKQPEIRTVQGEIERVLHTILRVPEGDPTEPLRLTVAGR
TDTGVHASHQVCHLDVNEDVLKRCVGHMDVPPVIALTRRLQRMLPADIAIRGIAPAPDGF
DARFSALERTYVYRIADRSSEADPRTRNFVLHIDDELDLKSMNEAAAMTIGLHDFGSFAT
PNPGGTTIREVKTAYWRRVPQRTLIDDGMTMGERYRTPTVESGLVCFVIVADAFARNMVR
SLVNGCVQVGIGKRSLDWFAGKMAAPLREGSTGPIAPQGLTLEHIEYPADDQLAVRAEAI
RAKRTL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgccgtgagactacgcatcgatttggcatatgacggtaccggcttctacgga
tgggcgaaacagcccgaaatacgtacggtacagggcgaaatcgaacgcgtgctgcatacc
attcttcgcgtaccggaaggagacccgaccgaaccgctgcgccttaccgtggccggacga
accgacaccggcgtgcacgcctcgcatcaggtatgccatctggacgtcaacgaggacgtg
ctcaaacgctgcgtcggccacatggacgtgccgcccgtcatcgcgcttacccgcagactt
cagcgcatgctgccggccgatatcgcaatccgcggcattgcacccgctccggacggtttc
gacgcgcgtttctccgcgttggaacgtacctacgtgtaccgaatcgccgataggtcaagc
gaggcggacccccgtaccagaaacttcgtattgcatatcgacgatgaacttgacctcaaa
tccatgaacgaagccgctgcgatgacgatcggcctgcacgatttcggctcgttcgccacc
ccaaatccgggcggcaccaccatacgcgaggtgaagaccgcgtattggcgtcgcgtgccg
cagcggacgcttatcgacgacggcatgacgatgggggagcggtaccgtacgccgaccgtg
gaatcgggcctcgtctgcttcgtgatcgtcgccgacgcgtttgcacgcaatatggtgcgc
tccctcgtcaacggctgcgtgcaggtcggtatcggcaaacgttccctcgactggtttgca
ggaaaaatggcggctccgctgcgcgaaggctccacaggaccgatcgcgccgcaaggactg
acgctggagcatatcgaatatccggccgacgaccagctggcggtccgcgccgaagccatt
cgcgccaagcgtacactgtag
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