Bifidobacterium adolescentis BBMN23: BBMN23_0386
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Entry
BBMN23_0386 CDS
T03774
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bado
Bifidobacterium adolescentis BBMN23
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bado03016
]
BBMN23_0386
Enzymes [BR:
bado01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBMN23_0386
Transfer RNA biogenesis [BR:
bado03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBMN23_0386
Prokaryotic type
BBMN23_0386
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Tli4_N
Motif
Other DBs
NCBI-ProteinID:
AJE05358
UniProt:
A0A0B5BF75
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All DBs
Position
463903..464973
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AA seq
356 aa
AA seq
DB search
MTTKPDNSGLLVIDKPQGVTSHDVVAAVRGALHMKRVGHAGTLDPMATGVLVVGFGNATR
LLNYIVDHDKTYLATIRLGQRTTTDDADGELLPEEGTIAEFPSRQTVEDVIAHHFTGRIE
QVPNSYSAIKINGQRAYDLAREGKDVDLKARPVTISEFSVSAVRYGYASTTCAGSPLADA
VEIAPEESWHAETDGQNEPNMQPVMELDVAVTCSAGTYIRALGRDLGSELGLGGHLTMLR
RIRVGRFSVDMPNVMTAHTEAKTFTNREGIEVTRNRAVLDDAEHAIDHALDLVASAAASM
DMLPVTEQEATDLRFGRRIAHDIHTTMAAYVPETNDLVAIVERAKRGETKPVAVFN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaagcctgacaactccggtctgctggtcatcgacaagccgcagggcgtcacc
agccacgatgtggtcgcggcggtgcgtggcgccctgcacatgaaacgcgtcggccatgcc
ggcacgctcgacccgatggccaccggcgtgctggtggtcggcttcggcaacgccacacgt
ctgctcaactacatcgtcgaccacgacaaaacctacctggccaccatcagactcggccag
cgcaccaccacggacgacgccgacggcgaactgctgccggaggagggaactatcgccgaa
ttcccttcacgacagaccgttgaagacgtcatcgcccatcatttcaccgggcgcatcgag
caggtgccgaactcctattcagccatcaaaatcaacggccagcgcgcctatgatctggcc
cgagaaggcaaggatgtggacctcaaggcccgtccggtgaccatctcggaattcagtgtt
tcggcagtgcgatacggctatgcttcgaccacatgcgcgggatcacctcttgccgatgcc
gtcgaaatcgccccggaggaatcctggcatgccgaaaccgacgggcaaaacgaaccgaac
atgcagccagtcatggaactcgacgtggccgtgacctgctcggccggcacctacatccgc
gcactcggccgcgatctgggctccgaactcggtctcggcggccatctgaccatgctgcgc
cgcatccgcgtcgggcgtttctcggtggacatgccgaacgtcatgaccgcccatacggaa
gccaaaaccttcaccaaccgcgaaggcatcgaagtgacacgcaaccgtgcggtgcttgac
gatgccgagcatgccattgaccacgcactcgacctggtcgccagcgcggccgcttccatg
gacatgcttcccgtcaccgaacaggaggcgacggacctgcggttcggccgtagaatcgcc
cacgacatccatacgaccatggccgcatacgttcccgaaaccaacgatctggtggcgatc
gtggaacgcgccaaacgtggcgagaccaagccggtcgcggtcttcaactga
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