Bifidobacterium adolescentis BBMN23: BBMN23_0814
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Entry
BBMN23_0814 CDS
T03774
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bado
Bifidobacterium adolescentis BBMN23
Pathway
bado03420
Nucleotide excision repair
bado03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBMN23_0814
03430 Mismatch repair
BBMN23_0814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bado03400
]
BBMN23_0814
Enzymes [BR:
bado01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBMN23_0814
DNA repair and recombination proteins [BR:
bado03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBMN23_0814
MMR (mismatch excision repair)
Other MMR factors
BBMN23_0814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
CarD_TRCF_RID
AAA_22
DUF2474
Herpes_UL42
Motif
Other DBs
NCBI-ProteinID:
AJE05786
LinkDB
All DBs
Position
948076..950766
Genome browser
AA seq
896 aa
AA seq
DB search
MFEYERARRKEESVEQSMGPVMCDPRSLIEGLNPQQEEAVKYYGQALLIGAGAGSGKTRV
LTRRIAWLLAHGFWASSILAITFTNKAAAEMRERLVTLVGPEAEHMWISTFHSACVRILR
RDGKEIGLKSGFSIYDTADSERLVKLIAADLNIDTKRYTPRMLLGKISDCKNALVFWKDQ
LKKANCDYTPGQRGYQVSAGDVDELVAVVYAEYQHRLALANAVDFDDLIMRTVELLQTCP
QVSEYYRHRFRYIFVDEYQDTNHAQYVLVRELSGIDSDEQPDPQARGAGRVGPSWITVVG
DSDQSIYAFRGADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIAKNENRKPKK
LWTALGQGDKIVGYAADNAQQEAGWIANEIARIHTEEDVAYRDIAIMYRANAQSRSLEEA
MINANLPYQLVGGTKFYERREVKDAIAYLQAIVNPADNVNVRRILNVPKRGLGARAEGLV
AGYADAHGLTFFESIEHMDQIEGMTGRTTKPLGAFRDLMHELADFAKEHDSKPSEVVAEV
LDKSGLLEELQRSEDPQDASRVDNLSQLQSVAAEFEQNTPDATLAGFLETTALVADSDQL
PGEGEDSGKVTMMTLHTAKGLEYPYVFLTGMEQGTFPHQRAMEDTSELSEERRLAYVGIT
RAKRRLYVTRAAVRAQWGQANDMMPSQFLDEIPDELIDWKRREAGVERMRASWGDDDEFG
GWDDDDDFGSTSFGESMYGSSTYGSSSYGSGSRGSHSTYGSSHGSHSSYGSGRSSYGSGS
RRFSGGLHSGSSSYGSYGSSRSSYGSGKPSGKSGKVTTRRAKPKDLTKSAPASSLDGNNG
LSISDFQIGDRITHDHYGLGKVIETQDKGANSVITVDFGTDGVKRLLLRVAPIEKL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatatgagcgtgcgcgaagaaaagaggaatcggtggaacagagcatgggacct
gtgatgtgcgatccgcggagcctgatagagggactcaacccccaacaggaagaagcggtg
aaatactacggccaggcattgctcatcggcgccggcgcaggctcaggcaagacccgtgtg
ctgacacgtcgcatcgcatggctgctggcgcatggcttctgggcaagcagcatcctcgcc
atcaccttcaccaacaaggcggccgcggaaatgcgtgaacgtctcgtgactttggtcggg
ccggaagccgaacatatgtggatctccaccttccactccgcctgcgtacgcatcctacgc
cgcgacggcaaggaaatcggccttaaatcgggcttctcgatttacgacaccgcggacagc
gagcgactggtcaaactgatcgcagccgacctgaacatcgatacgaagcggtatacgcca
cgcatgctgctgggcaagatatccgactgcaagaacgcgttggttttctggaaagaccag
ctgaaaaaagcgaactgcgattacaccccgggacagcgcggataccaggtgagcgccggc
gacgtcgacgaactggtcgccgtcgtctacgccgaataccagcatcgtctggcgctcgcc
aacgcagtcgacttcgacgatttgatcatgcgcaccgtggaattgctccaaacctgcccg
caggtgagcgaatactatcggcacaggttccgttacatcttcgtggacgagtatcaagac
accaaccatgcccaatatgtgctcgtacgtgaattgtccggcatcgattcggacgaacag
cccgacccgcaggcgaggggagcgggccgtgtgggaccgagctggattaccgtggtgggt
gattccgaccaatccatctacgcgttccgaggtgcggacatccgtaacatccaagacttc
gaacaggatttcccgaacgccaaaaccatcatgctcgaacagaactaccgttcgacgcag
accatcctcgacgcggcgaacgcggtgatcgcgaaaaacgaaaaccgcaagccgaagaaa
ctgtggacggcgcttggtcaaggcgacaaaatcgtcggctatgccgccgacaacgcacag
caggaagccggatggatagcgaacgaaatcgcacgaatccacaccgaggaagacgtcgct
taccgtgacatcgccatcatgtaccgagccaacgcgcagtcacgttcgctggaagaggcc
atgatcaacgccaatctgccgtatcagctggtcggcggcaccaaattctatgaacgtagg
gaagtcaaggacgccatcgcgtatttgcaggccatcgtgaatcccgcggataatgtgaac
gtgcggcgtatcctcaatgtgcctaaacgaggactcggcgcacgcgcggagggattggtg
gccggctacgcggacgcgcatggcctcacgttcttcgaatccattgaacatatggaccag
attgaaggcatgacaggccgtaccaccaaaccgttgggcgcattccgtgatctgatgcac
gagctggccgatttcgccaaggaacatgattcgaaaccatccgaagtggtggccgaagta
ttggataaaagcggtcttctggaggaattgcaacgttccgaggatccgcaggatgcttcg
cgtgtggacaatctttcccagttgcagtccgtggccgccgaattcgaacagaacacgccg
gatgccacgttggccggttttctggagaccacggcattggtcgccgactcggatcagttg
ccgggagagggcgaggattccggcaaggtcacgatgatgaccttgcatacggccaaaggt
ttggaatatccgtatgtgtttcttacgggtatggaacagggtacgttcccgcaccagcgt
gccatggaggacaccagcgagctgtccgaggagcgtcgtctggcatacgtgggcatcacc
cgtgcgaagcgtcggctatatgtgacccgtgcggcggtgcgtgcccaatgggggcaggcc
aatgacatgatgcccagccagttcctggatgagattccggatgaactcatcgattggaaa
cgtcgtgaggccggtgtggagcgcatgcgcgccagctggggagatgacgacgagttcggc
gggtgggacgatgatgacgatttcggatccacttccttcggcgaatcgatgtacggatcg
tcgacatacggttcctcatcgtatggttctggttctcgcggatcgcattccacttatggg
tcgtctcatggatcgcacagctcgtatggttccggacggtcctcctacggctcgggaagc
cgccgtttctctggcggattgcactctggctcgtcctcatacggttcgtatggctcatcc
cggtcgtcatacggttccggcaagccctccggcaaatccggtaaggtcaccacgcgccgc
gccaagccaaaggatctgacgaaatcggctccggcaagttcgttggacggcaacaacgga
ttgagcatctcggatttccagataggcgacagaatcacccatgaccattacggtttggga
aaggtcatcgaaacgcaggacaagggcgcgaattcggtgatcaccgtcgatttcggcacg
gatggcgtcaaacgattgctgcttcgtgtggcgcctattgaaaagctctga
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