Bifidobacterium adolescentis BBMN23: BBMN23_0947
Help
Entry
BBMN23_0947 CDS
T03774
Name
(GenBank) putative helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
bado
Bifidobacterium adolescentis BBMN23
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bado03019
]
BBMN23_0947
Enzymes [BR:
bado01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BBMN23_0947
Messenger RNA biogenesis [BR:
bado03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BBMN23_0947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJE05919
UniProt:
A0A0B5BL33
LinkDB
All DBs
Position
1099354..1101957
Genome browser
AA seq
867 aa
AA seq
DB search
MTHHRRHGNNDTGTYDAEMTTALSPAQRYAAFKQTQAKRQSVSSRFARSMPFELDDFQVK
ANDALEAGDNVLVAAPTGAGKTVVADFAIYLAQERNVKAFYTTPIKALSNQKYHDLVETY
GPDRVGLLTGDTSINSEADIVVMTTEVLRNMLYEHSMTLDALRYVILDEVHYLADRFRGP
VWEEVIIHLPQSVRIIGLSATVSNVEDFSKWIESVRGDTTLVVSEKRPVPLEQHVLVQAD
DHTEPELIDLYRRDKDGNQTDKLNAQLVSRLDQLDRKAAKRRGEQRPDRRKGGKGGKWND
HSRRPERHTPRRWAVIDELNFLGILPGIYFIFSRNGCDQAVEQCINAGLELTTDDEVRRI
RRIVDEMVEGQLSQEDLKALHFSQFRFALEEGFAPHHAGMVALFRQIVERLFEEGLVKVV
FATETLALGINMPARCVVVEKLEKFDGTGHVGLTPGEFTQLTGRAGRRGIDTIGHAVVVD
HHGFIPATAAALSSKRVYPLHSSFKPTFNMAVNLLNSSDYETARITLDHSFAQWEANESA
WQLEAQMDTLRKALDGYERAFDCEFGDFKEFMRLRMRLSDLEKNERRKLKHEVFRTQKAR
SEAFKDLDRRIAELREKDRDHPCRKCPDIQKHLKWGHRWAREMRELERVQHRYDSRTGSV
ARQFDRICNVLNELGYLDRLDEGAKEHIDYRLTERGQLLRHLYSELDLVLAQAIDDGAFD
GLDATELASAVMSLIYEPRRGSGGEPRHYPGGMQGNVAVCAAQLKGVHASIAMLCEDYAL
DEPRQLDFGITDVVYEWAQGESLSRVLYGTDLTGGDFVRGCKRLADVLQQIAVAGPYLGK
RAETLAPIAKQAYENVNRGIVAYSGVD
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgactcatcatcgtcgacatggcaataacgacaccggcacatacgatgccgagatgacc
acagccctatctcccgcgcaacgctatgcggcgttcaaacagacgcaggccaaacgccaa
tcggtctcgtctcgtttcgcacggtccatgccattcgaattggacgatttccaagtcaaa
gccaatgatgcgttggaagccggcgacaatgtgctcgtcgccgcgcccaccggagccggc
aagacggtcgtggctgatttcgcgatctatctggcccaagagcgtaacgtcaaagcgttc
tacaccacgccaatcaaagcgttgagcaatcagaaataccatgatctggtcgaaacgtac
gggccggacagagtcggcctgcttaccggcgacacgtccatcaactccgaagccgacatc
gtggtcatgaccaccgaggtcctgcgcaacatgctctacgagcattccatgacgcttgac
gccttgcgttacgtgattcttgacgaggtgcactatctcgccgaccgtttccgcgggccg
gtgtgggaggaagtgatcatccacctgccccaaagcgtgagaatcatcggcctgtccgca
accgtgtcaaatgtcgaggacttctccaaatggattgaatcggtccgtggcgacaccacg
ctggtggtgtccgaaaaacggcccgtgccgttggaacagcatgtgcttgttcaggcggac
gaccacaccgaaccggaactcatcgacctgtatcgacgtgataaagacggcaatcagaca
gacaagctcaacgcccagctggtgagcaggctcgatcagctcgaccgcaaggccgcgaaa
cgtaggggagagcagcgccccgacagacgaaagggcggcaagggcggcaaatggaacgac
cattcccgcagacccgaacgccatacgccacgtcgttgggccgtgattgatgaattgaat
ttcctcggcatcctgccgggcatctatttcatcttctcccgcaacggatgcgatcaggcc
gtcgaacaatgcatcaacgccggactcgaactcaccaccgatgacgaggtgcgtcgcatc
cgccgtatcgtcgatgagatggtcgaaggccaactcagtcaagaggatttgaaggctttg
catttctcgcagttccgcttcgccttggaggaaggattcgcgccgcatcatgctggcatg
gtggcgctcttccgccaaattgtcgaacgactgttcgaagaggggctggtgaaggtcgtc
ttcgccacggaaacacttgccttgggcatcaacatgccggcacggtgcgtggtggtggaa
aaacttgagaaattcgatgggaccgggcatgtcggattgacgccaggggagttcacccag
cttaccggacgcgctggccgacgtggcatcgacaccatcggccatgcggtggttgtggac
catcatggcttcattcccgccactgccgccgcgctgtccagcaagcgcgtgtacccgctg
cactccagtttcaaaccgacgttcaacatggccgtcaacctgcttaattccagcgattac
gagaccgctcgcatcacgcttgaccattccttcgcgcaatgggaggccaacgaatccgcc
tggcagcttgaagcgcagatggatacgttgcgcaaagcgttggacggatacgaacgggcg
ttcgattgtgagttcggcgatttcaaggagttcatgcggctgcgcatgcgcttgagcgac
ttggaaaagaacgaacgacgcaaactcaagcacgaggtgttccgcacgcagaaggcgcga
agcgaagcgttcaaagaccttgacaggcgtatcgcggagcttcgcgaaaaagacagggac
catccctgccgcaaatgccccgatattcagaagcatctcaaatgggggcatcggtgggcg
cgtgaaatgcgtgaattggaacgtgtgcagcaccgctacgattcacgcaccggctccgtg
gcacgtcaattcgaccgcatctgcaatgtgctgaacgagctcggatacctcgatcggctt
gatgaaggcgcaaaagaacatatcgattaccggcttaccgaacgtggacagctgttgcgg
cacttgtacagcgagcttgatttggtgcttgcccaggcgatcgatgatggcgcgttcgac
ggactcgatgcgacggagctggccagcgccgtcatgtcgttgatttacgagccacgcaga
ggcagcgggggagagccgcgccattatcccggaggaatgcaggggaacgtcgccgtctgt
gcggcgcagctcaaaggcgtgcacgcgtcgattgccatgctgtgtgaggactatgccctc
gacgagccgcgccaacttgatttcggcatcaccgatgtcgtctacgaatgggctcagggc
gaaagcctgtcgcgtgtgctgtacggcaccgatttgaccggcggcgatttcgtacgcgga
tgcaaacgtctcgccgacgtgttgcagcagatcgccgtggccggaccatacctgggtaaa
cgcgccgaaacgctcgctccgatcgcgaaacaggcgtacgagaacgtcaaccgtggcatc
gtcgcctattcaggtgtcgactga
DBGET
integrated database retrieval system
