Bifidobacterium adolescentis BBMN23: BBMN23_1131
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Entry
BBMN23_1131 CDS
T03774
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bado
Bifidobacterium adolescentis BBMN23
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bado03016
]
BBMN23_1131
Enzymes [BR:
bado01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BBMN23_1131
Transfer RNA biogenesis [BR:
bado03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BBMN23_1131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF5499
Motif
Other DBs
NCBI-ProteinID:
AJE06103
UniProt:
A0A0B5BH89
LinkDB
All DBs
Position
complement(1297647..1298942)
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AA seq
431 aa
AA seq
DB search
MTDEPKLLAEPREGVPNVIDTLPAFRDYCSELASSHGSLAADAERASGFRYGHEDWLVQF
KRDGAGIGLLDPQALAAAGADWNDFNRAVGDAVWILHDSLQDLPGFDELGMEPQRLFDTE
IAARLLGLKRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETK
MRAELKRQGKMEWAQEEFDYALKEGLGPRKEHLIPWMHVSHITEVMRDRQALAIVRALWT
RRDELAREYDIAPTLLLSDSSIIEVAKRKPHNAAQFRSIRSINERVRIHTDSEQDKMFER
YAPIQRKIKPSMWKNIIQDALALPPSEWPDVDGGAARRHESQSASAPKSIRVWKERYPER
LQVLNRVRKAVSQIAEDTRTPVEIVIKPQYLRNLCWTDEPRKRDVARFLSEQGARDWQVS
LVAESVSRAIM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgactgacgagccgaagctgctggcggaaccgcgcgaaggcgtgcccaacgtgatcgac
acgttgccggcattccgtgactattgcagtgagctggcttcctcacatggctcccttgcc
gcggacgcggaacgcgcatccggcttccggtatgggcatgaggactggttggtgcagttc
aaacgcgacggagccggcatcggcctgctcgatccgcaggcgctcgccgcggccggggcg
gattggaacgatttcaaccgtgccgtcggagatgcggtatggattctgcatgattccctg
caggatcttccgggattcgacgaactcggcatggaaccgcaacggctgttcgacacggaa
atcgccgcgcgtctgctgggattgaaacgattcggactcgccgctgtcaccgagcatttt
cttggactgacccttgccaaagaacattctgcggctgactggtcgtatcgtccgttgccc
cgcgactggcgaaattacgcggcgttggacgtcgaactgctcatcgagcttgaaacgaag
atgcgcgccgaactcaaacgccaaggcaagatggaatgggctcaggaagagttcgattac
gcgctcaaagaaggtctgggaccacgcaaggagcatctgattccctggatgcatgtctcg
cacatcactgaagtcatgcgtgaccggcaggcgctggccatcgtccgcgcgctatggacc
cgacgcgacgaactcgcgcgcgaatacgacatcgcgccgaccctgctattgtccgacagc
tccatcatcgaagtggcgaaacgcaaaccacacaacgctgcgcaattccgttcgattcgc
tccatcaacgaacgtgtgcgcatccataccgattccgaacaggacaagatgttcgaacgg
tacgcgccgattcaacgcaaaatcaaaccgagcatgtggaagaacatcatccaggacgcg
ctcgccctgccgccaagcgaatggccggacgtggacggcggcgccgcgcggcgtcatgaa
tcgcagtcagcctcggctcccaaatcgattcgcgtgtggaaggaacggtatccggaacgt
ctgcaagtgctcaacagggtgcgcaaggcggtctcccagatagcggaggacacgcgcacg
cctgtggaaatcgtcatcaaaccgcagtatttgcgtaacctgtgctggacggacgaacct
cgtaagcgtgacgtcgcgcgattcctcagcgaacagggcgcacgcgactggcaggtctcc
ctagttgcagagtccgtaagtcgcgctattatgtag
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