Bifidobacterium adolescentis BBMN23: BBMN23_1347
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Entry
BBMN23_1347 CDS
T03774
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bado
Bifidobacterium adolescentis BBMN23
Pathway
bado03030
DNA replication
bado03430
Mismatch repair
bado03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBMN23_1347
03430 Mismatch repair
BBMN23_1347
03440 Homologous recombination
BBMN23_1347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bado03032
]
BBMN23_1347
03400 DNA repair and recombination proteins [BR:
bado03400
]
BBMN23_1347
Enzymes [BR:
bado01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBMN23_1347
DNA replication proteins [BR:
bado03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBMN23_1347
DNA repair and recombination proteins [BR:
bado03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBMN23_1347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
DNApol_Exo
CAF1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AJE06319
LinkDB
All DBs
Position
complement(1549256..1549786)
Genome browser
AA seq
176 aa
AA seq
DB search
MSDYCVLDTEITGLSAYYDEVIEIGILKVRSGDVTDRYEQLIRPKYEIDGFITSLTGITN
EMVADKPPIEDVKGDVLAFLENDIIVGHNTSFDVRFLAAGFQENINNEYMDTMQFARKLY
PDLPHHRLSDLSEYLNLTNNEHRAIADCVTTMELYEAMKTEMAQKGLGIRDLWRCM
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagattactgcgtgcttgacacggagatcacaggtctttccgcctattatgacgag
gtgattgagattggaattctgaaggtgcgcagtggagatgtgaccgacaggtatgaacag
ctgatcagaccgaagtatgaaatagacggattcatcaccagcctgactggcatcacaaac
gaaatggtggcggacaagccgcctatcgaagatgtgaagggagatgtcctcgcgtttttg
gaaaacgacatcatcgtcggtcataacacgtcctttgatgtccgattcctcgccgcggga
ttccaagagaacatcaataacgagtacatggatacgatgcagtttgccagaaaactgtat
cctgatttgcctcatcaccggctttcagatttgtccgagtatctgaatctgacgaacaat
gaacatcgagccatcgcggactgtgtcacaacgatggagctgtatgaggcgatgaaaacc
gaaatggctcagaaaggactgggcatcagagacctgtggcggtgtatgtga
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