Bifidobacterium adolescentis BBMN23: BBMN23_1416
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Entry
BBMN23_1416 CDS
T03774
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bado
Bifidobacterium adolescentis BBMN23
Pathway
bado03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBMN23_1416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bado03019
]
BBMN23_1416
Messenger RNA biogenesis [BR:
bado03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBMN23_1416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Cuticle_1
DUF1732
Motif
Other DBs
NCBI-ProteinID:
AJE06388
LinkDB
All DBs
Position
complement(1650221..1652200)
Genome browser
AA seq
659 aa
AA seq
DB search
MATEETTKTTTHKRGSKAAKRTETAVKASKTTKAAKSEKTAIKKAKSSTRSRGNGGSRNG
GSRGSRGGNGSNRRPSHSAPQSTAPQQDEVLIAPPKYRKGSMRIVPLGGLGEIGRNMNVV
EYNGHILLIDCGVLFPEEEQPGVDLILPDFHYIKDRLDKVEALVLTHGHEDHIGGVPYLL
KLRPDIPLIGSKLTLAFVEAKCKEHRINPTLVEVKGRDKLKVGPFNLEFVNVTHSIPDAL
AVFVQTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKLGEKGVDLLMMDSTNAEVPGFVKP
ETSIGPALDQAFAQATRKIIVASFSSHVHRVQQVVDAAHKYGRKVVFVGRSMVRNMSIAA
DLGYLRLPEDTVIDLKQAHDVQDDKLVYMCTGSQGEPMAALGRIADGNHRDITINEFDTV
ILASSLIPGNEHGVYKVINKLVQLGARVVNRDNAAVHVSGHCNEGELLYMYNIVKPKCAM
PIHGENRHLVANGMIAVKTGVDPQNVVLAEDGDVVDLYHGQAAVVGSVPCGYVYVDGDSV
GELTDEELEKRRILGTEGFVSSFVVVDTETADVITGPKIYLNAVAEDESEFDKVRHQIVE
QLQDAMMQGTRDTYKLQQIMRRTLGGWVARQLHRKPMIVPVVADIAQDVDDAMGLNAAK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaagaaaccacaaagacaacaacacacaagcgcggcagcaaagctgccaag
cgcactgaaaccgcagtcaaggcatccaagaccactaaggccgcgaagtccgagaagacc
gccatcaagaaggccaagtcctccacccgcagccgtggcaacggtggctcgcgcaacggc
ggctcccgtggatcccgtggcggcaacggttcgaaccgtcgtccgtcgcattccgcgccg
caatccaccgcgccgcagcaggacgaggtgctgatcgccccgccgaagtaccgcaagggc
tccatgcgcatcgtgccgctcggcggtctgggtgagatcggccgcaacatgaacgtggtc
gaatacaacgggcatatcctgctcatcgactgcggcgtgctcttcccggaagaggagcag
ccgggcgtggacctcatcctgcctgacttccactacatcaaggaccgtctcgacaaggtc
gaggcgcttgtgctcacccacggccacgaggaccatatcggtggcgtgccgtacctgctc
aagctccgcccggacattccgctgatcggttccaagctcaccctcgccttcgttgaggcc
aagtgcaaggaacaccgcatcaacccgacgctcgtcgaggtcaagggacgcgacaagctc
aaggtcggcccgttcaacctggaattcgtgaacgtcacgcactccattccggacgcgctc
gccgtgttcgtgcagacccccgccggctcgcttatcgacaccggcgacatcaagctcgac
cagctgccgctcgaccaccgcatcaccgatctggtggaattcggcaagcttggcgaaaag
ggtgtggatctgctgatgatggactccaccaacgccgaggtcccgggcttcgtcaagccg
gagacctccatcggtccggcgctcgaccaggcgttcgcacaggccactcgcaagatcatc
gtggccagcttctccagccacgtgcaccgcgtgcagcaggtcgtggacgccgcccacaag
tacggccgcaaggtcgtgttcgtcggacgttccatggtccgcaacatgtccatcgcagca
gatctgggctacctgcgtctgcccgaggacaccgtcatcgacctgaagcaggcccatgac
gtgcaggacgacaagctcgtctacatgtgcaccggctcccagggcgagccgatggccgcg
ctcggccgcatcgccgacggcaaccaccgcgacatcaccatcaacgagttcgacacggtg
attctcgccagctccctgatcccaggtaacgagcatggcgtctacaaggtcatcaacaag
ctcgtgcagctcggagcccgcgtggtcaaccgagacaacgccgccgtgcacgtctccggc
cactgcaacgaaggcgagctgctgtacatgtacaacatcgtcaagccgaagtgcgccatg
cctatccacggcgaaaaccgccacttggtggccaacggcatgatcgccgtcaagaccggc
gtcgatccgcagaacgtcgtgctggccgaagacggcgacgtcgtcgacctgtaccacggc
caggccgcggtcgtcggctccgtgccgtgcggctacgtctacgtcgatggcgattccgtc
ggcgaactgaccgacgaagaactcgagaagcgccgcatcctcggcaccgaaggcttcgtg
tccagcttcgtggtcgtcgacaccgaaaccgcggatgtcatcaccggcccgaagatctac
ctcaacgcggtcgcggaagacgaaagcgagttcgacaaggtccgtcaccagattgtcgag
cagctgcaggacgcgatgatgcagggcacgcgcgacacctacaagctgcagcagatcatg
cgacgcacactcggcggctgggtggcacgacagctgcaccgcaagccgatgatcgtcccc
gtcgtcgccgacatcgcgcaggacgtggatgacgcgatgggactgaacgccgcgaaataa
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