Bacillus atrophaeus: BATR1942_01385
Help
Entry
BATR1942_01385 CDS
T01339
Name
(GenBank) GXT repeat-containing collagen-like protein
KO
K06236
collagen type I alpha
Organism
bae
Bacillus atrophaeus
Pathway
bae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
BATR1942_01385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bae00536
]
BATR1942_01385
Glycosaminoglycan binding proteins [BR:
bae00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
BATR1942_01385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
ADP31235
LinkDB
All DBs
Position
292023..296030
Genome browser
AA seq
1335 aa
AA seq
DB search
MSNLIVNGGFETGDLTGWSSAYTEINSQFVHTGRYSAQFANTIPFAFLAQMIPVTAGQSL
AFQVSLGTLGIEPSPQVSMQILFVNDIGEQIGTGLDVVIVPDNLPNLVFNAWNEIYQTTH
QIPSDGAFAIIIISKTSFGPVLIDDVSIVEFVNGIGVTGPTGVTGVTGATGPTGVTGATG
VTGATGATGETGPTGVTGVTGATGVTGPTGPTGETGVTGVTGETGPTGVTGVTGVTGPTG
PTGEMGATGVTGVTGVTGSTGETGPTGEMGATGVTGATGATGETGSTGVTGVTGETGPTG
VTGVTGVTGVTGVTGSTGVTGATGETGPTGVTGSTGATGVTGSTGVTGVTGSTGSTGATG
VTGVTGATGSTGVTGPTGPTGETGSTGVTGVMGVTGSTGETGVTGPTGSTGSTGVTGVTG
STGATGVTGVTGSTGETGPTGEMGATGVTGVTGETGPTGVTGVTGATGATGVTGPTGVTG
PTGATGVTGPTGATGVTGSTGVTGSTGATGATGVTGVTGATGSTGVTGVTGETGSTGVTG
STGATGETGPTGVTGSTGVTGETGVTGATGETGPTGSTGSTGETGPTGEMGATGVTGVTG
ETGPTGVTGVTGATGATGATGATGATGATGATGATGVTGPTGPTGETGATGVTGVTGVTG
STGETGVTGPTGSTGSTGVTGVTGATGATGVTGVTGSTGETGATGVTGVTGSTGETGPTG
EMGATGVTGVTGETGPTGVTGVTGATGATGVTGPTGVTGPTGSTGVTGSTGATGATGVTG
VTGATGVTGVTGATGSTGVTGVTGETGSTGVTGSTGATGETGVTGSTGVTGETGVTGATG
ETGPTGSTGSTGSTGVTGVTGATGVTGSTGSTGVTGATGETGSTGATGSTGVTGATGETG
STGVTGATGETGPTGEMGATGVTGVTGETGPTGVTGSTGVTGETGETGPTGSTGATGPTG
VTGATGETGSTGVTGATGETGPTGVTGATGETGSTGVTGATGETGPTGVTGETGATGPTG
PTGVTGETGPTGEMGAKGVTGVTGATGSTGSTGVTGVTGVTGSTGATGVTGSTGVTGATG
STGSTGVTGATGATGSTGSTGVTGATGVTGSTGPTGVTGVTGSTGPTGVTGSTGVTGATG
STGATGVTGVTGATGSTGSTGSTGSTGSMGSTGVTGVTGETGSTGPTGPTGVTGATGVTG
PTSESPQLFFTEVAGPVTVAVNSTETTIGSLNVPTTIGQNIKVDFAISVDVVTTANSNFT
FQVRTYRNGTLLDTRTVQRNVNVAITSRFPIASTNVNTAATTGTTTYEVRIIFTSVSNVS
SASALNLDINAIRFS
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctcattgtaaacggagggtttgaaactggcgatttgacgggatggagttcc
gcatatactgaaataaacagtcaatttgtccataccggaagatattctgcacagtttgct
aatacaataccttttgcttttctcgcacaaatgattccggttactgccgggcaatcactg
gccttccaagtttctttagggacacttggtattgaaccaagtcctcaagtatcgatgcaa
atcttattcgtaaacgacataggcgaacaaattggaaccgggttagacgtggtcattgtt
cctgacaatttaccgaatcttgtatttaatgcctggaatgaaatctatcaaacaacacat
caaataccgtcggatggagctttcgctattatcataattagtaaaacatcttttggtcct
gttttaatagatgatgtttcgatcgttgagtttgtgaatggaatcggagtaacaggacca
acaggtgtaactggcgtaacgggggcaaccggaccaacaggtgtaacgggagcaacagga
gtaaccggagcgacaggagcaacaggagaaaccggaccaacaggtgtaacaggcgtaacg
ggggcaacaggtgtaaccggaccaacaggtccaacaggagaaacgggagtaactggagta
actggagaaaccggaccaacaggtgtaaccggagtaacgggagtaacaggaccaacaggt
ccaacaggagaaatgggagcaacaggtgtaactggagtaacgggagtaacaggatcaacc
ggagaaacaggtccaacaggagaaatgggagcaacaggtgtaaccggagcaacaggtgca
acaggagaaacgggatcaactggagtaactggagtaacaggagaaaccggaccaaccgga
gtaacgggagtaacaggtgtaactggagtaacgggagtaacaggatcaaccggtgtaacc
ggagcgacaggagaaacaggtccaacaggagtaacgggatcaaccggtgcaacaggagta
acgggatcaactggtgtaactggtgtaaccggatcaacgggatcaacgggagcaactggt
gtaactggagtaacaggagcaacaggatcaacaggtgtaaccggaccaacaggtccaaca
ggagaaacgggatcaacaggtgtaactggagtaatgggagtaacaggatcaaccggagaa
accggagtgacaggtccaactggatcaaccggatcaacgggagtaactggtgtaaccgga
tcaaccggtgcaacaggagtaacgggagtaacaggatcaaccggagaaacaggtccaaca
ggagaaatgggagcaacaggtgtaaccggagtaacaggagaaaccggaccaacaggtgta
accggagtaacgggagcaacaggagcaactggtgtaaccggaccaacaggagtaacggga
ccaacaggtgcaacaggagtaacgggaccaacaggtgcaacaggagtaacgggatcaact
ggtgtaaccggatcaacgggagcaactggagcaactggtgtaactggagtaacaggagca
acaggatcaacaggtgtaaccggagtgacaggagaaacaggatcaactggtgtaactgga
tcaacaggagcaaccggagaaaccggaccaaccggagtaacgggatcaacaggtgtaacg
ggagaaaccggagtaacgggagcgacaggagaaaccggaccaacaggatcaacaggatca
accggagaaacaggtccaacaggagaaatgggagcaacaggtgtaactggagtaacagga
gaaaccggaccaacaggtgtaaccggagtaacgggagcaacaggagcaacaggagcaaca
ggagcaacaggagcaacaggagcaacaggagcaacaggagcaacaggtgtaaccggacca
acaggtccaacaggagaaacgggagcaacaggtgtaactggagtaacgggagtaacagga
tcaaccggagaaaccggagtgacaggtccaactggatcaaccggatcaactggagtaact
ggtgtaaccggagcaacaggtgcaacaggagtaacgggagtaacaggatcaaccggagaa
acaggtgcaacaggagtaacgggagtaacaggatcaaccggagaaacaggtccaacagga
gaaatgggagcaacaggtgtaaccggagtaacaggagaaaccggaccaacaggtgtaacc
ggagtaacgggagcaacaggagcaacaggtgtaaccggaccaacaggagtaacgggacca
acaggatcaactggtgtaaccggatcaacgggagcaactggagcaactggtgtaactgga
gtaacaggagcaactggtgtaactggagtaacaggagcaacaggatcaacaggtgtaacc
ggagtgacaggagaaacaggatcaactggtgtaactggatcaacaggagcaaccggagaa
accggagtaacgggatcaacaggtgtaacgggagaaaccggagtaacgggagcgacagga
gaaaccggaccaacaggatcaacaggatcaaccggatcaactggtgtaactggagtaaca
ggagcaacaggagtaacgggatcaaccggatcaactggtgtaacgggagcgacaggagaa
acaggatcaacaggagcaaccggatcaactggtgtaacgggagcgacaggagaaacagga
tcaactggtgtaaccggagcgacaggagaaacaggtccaacaggagaaatgggagcaaca
ggtgtaaccggagtaaccggagaaaccggaccaaccggagtaacgggatcaactggtgta
acgggagaaacaggagaaaccggaccaacaggatcaactggagcaacaggtccaactggt
gtaaccggagcgacaggagaaacaggatcaactggtgtaaccggagcgacaggagaaaca
ggtccaacaggagtaacgggagcgacaggagaaacaggatcaactggtgtaaccggagcg
acaggagaaacaggtccaacaggagtaacgggagaaaccggagcaacaggaccaacagga
ccaacaggagtaacaggagaaacaggtccaacaggagaaatgggagcaaaaggtgtaacc
ggagtgacaggtgcaactggatcaaccggatcaacgggagtaactggtgtaaccggtgta
accggatcaacaggtgcaactggagtaacgggatcaacaggtgtaactggagcaacagga
tcaaccggatcaacaggtgtaactggagcaaccggagcaacaggatcaaccggatcaaca
ggtgtaactggagcaacaggagtgacaggatcaaccggaccaacaggtgtaacaggcgta
acgggatcaaccggaccaacaggtgtaacgggatcaacaggtgtaacaggagcaaccgga
tcaacgggagcaacaggtgtaaccggagtaacaggagcaaccggatcaacaggatcaacc
ggatcaaccggatcaacaggatcaatgggatcaacaggtgtaaccggagtaacaggagaa
acaggatcaacaggtccaactggaccaacaggtgtaacgggagcaacaggagtcacagga
ccaacaagtgaaagtccacagctatttttcacagaagttgcaggcccagttactgtcgca
gttaatagcactgaaacaacaataggttcattaaatgtgccaaccactatcggtcaaaat
ataaaagtggattttgcaatatcagtagatgttgtcacaacagctaactctaactttact
tttcaagtgagaacgtatcgaaatgggactttgttagatacacgaacagtacaaaggaat
gttaacgttgcaataacttctagatttccaatagcttcgaccaatgtaaatacagcagct
actaccggaaccacaacttatgaagtaagaattatatttacatcagtaagtaatgtcagt
tccgctagtgcattaaatttagatataaacgcaattcgtttttcttaa
DBGET
integrated database retrieval system
