Bacillus atrophaeus: BATR1942_03565
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Entry
BATR1942_03565 CDS
T01339
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bae
Bacillus atrophaeus
Pathway
bae03420
Nucleotide excision repair
bae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BATR1942_03565
03430 Mismatch repair
BATR1942_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bae03400
]
BATR1942_03565
Enzymes [BR:
bae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BATR1942_03565
DNA repair and recombination proteins [BR:
bae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BATR1942_03565
MMR (mismatch excision repair)
Other MMR factors
BATR1942_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADP31667
LinkDB
All DBs
Position
complement(719284..721569)
Genome browser
AA seq
761 aa
AA seq
DB search
MKCARLNDRTIHLHTYSREHYQFLYEEAVKGHLFCAHCGRPVIMRLDILQEPEFLHREKG
DFSACEEACHSTSRKQEAKKEDYEESGVFRLPKGKAISADKSPVLTEWQPPRKINPGTPF
LKKPEAQHLSLFPTIGLNTDQLQAVTETEGPLLVLAGAGSGKTRVLTARAAHMIEHLGVS
PENMLLVTFTTKAVAEMKERMANEYGLAPQHVGRLVTGTFHSLFYKILYHYDSSKWNGDH
LLKMEWQKEQYIKKALYEEGADEKEFPVDQAIQQIGYWKNSYLPGERIPLKDEWEKQVYR
LYEHYERQKKEHGQFDFNDMASACYELFQLRPDILEHYQTRFTYILIDEFQDINPVQYKI
MQMLASPEQNLCCVGDDDQSIYAFRGSSPSFILDFQKDYPGAKTVYLTANYRSTHPIVSS
ADLVVKKNKKRYVKTLEATRDDVQHPVLFYPYDEEEEATMVVSDIKEKIQNGARPEDFAV
LYRTNSGGRAIYERLHQSSVPYTADRGVQSFYSRRIVRQILAYLYVSQNEDDTEAIKHLL
PALFLKQSALNTLKALSITEDCSMVKALTKLPDLKPFQLNKIKKIVPFFASLRTMKPVEA
ITFAEGKMGFSEYLKKRGNEGNKLEKGSDDLRDVKVVAKKFKTIPDFLAHVDHMRAAEKN
KTAENGVQLMTVHRSKGLEFKTVYVLGAVDGSIPHDFSLETARKGDETALEEERRLLYVA
MTRAEQHLYISCPANRRGKTAHRSRFLQPLMQLNKRSSLHK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatgtgcccgactgaatgatcgaacaatacatttacatacatattcgagagaacat
taccaattcctctatgaagaagcggtaaaaggacatttattttgcgcccattgcggaagg
cctgtcatcatgcggctcgatattcttcaggaacctgaatttctccaccgtgaaaaagga
gatttctcagcttgcgaagaggcttgccattcaacatctcgcaaacaggaagcaaaaaag
gaagattacgaggaatccggcgttttccgtttacctaaaggcaaagccatttcagccgat
aaatctcccgttctgacagaatggcagccgccaagaaagataaaccccggcacgcctttt
ctaaaaaaaccggaagcacagcacttgtctctttttccaacgatcggtttaaacactgat
cagcttcaggctgtaacggaaacggaaggtccgctgcttgtgcttgccggtgcggggagc
ggaaaaacacgcgttctgaccgcccgcgccgcccatatgattgaacaccttggcgtatcg
ccggagaacatgctgcttgtgacctttacgacaaaagcagtcgccgaaatgaaagaacgg
atggctaatgaatacggactggcgccccaacatgtaggaaggcttgtcaccggaacgttc
catagcttattttataagattctctatcattatgattcttccaaatggaacggagaccat
ctgctgaaaatggaatggcaaaaggagcagtatataaaaaaagcgctttatgaagaaggg
gcagacgaaaaagagtttcccgtcgatcaagcaatccagcagatcggctattggaaaaac
tcttatttgcctggagaacgcattcctttaaaggatgaatgggaaaaacaagtctaccgg
ctgtacgagcattacgaacggcagaaaaaagaacatggccaatttgattttaatgatatg
gcgtccgcgtgctatgaactgtttcaattgcggcctgatattctcgaacattatcagact
cgcttcacttatattttaatagatgagttccaagacataaatccggtgcaatataaaatc
atgcaaatgctcgccagcccagaacaaaatctgtgctgtgtcggagatgatgatcagtca
atttacgcgtttcgcggaagcagcccttcttttatcctcgactttcagaaggattatccc
ggggcaaagaccgtttacttaacggccaattacagatcgactcatccgattgtctcaagc
gctgatcttgtggtgaagaaaaataaaaagcggtatgtgaaaacgttagaagccacccgt
gacgatgtgcagcacccggtattgttttatccttatgacgaagaggaagaagcgactatg
gtcgtgtccgatataaaagaaaaaattcaaaacggcgcgcgtccggaagacttcgcggtt
ctttaccggacaaacagcggcgggcgggccatttacgaacggcttcatcaatcatcagtt
ccatatacagcggatcgcggcgttcaatccttttacagcagaagaatcgtccgccaaatt
ctggcttacttatatgtcagccagaacgaagatgatacagaagccatcaaacatctgctt
cccgcactgtttttaaaacagtcagccttaaatacgctaaaggctctctcgattacggaa
gattgctcgatggtcaaagctctgacaaagcttccggacctcaagcccttccagctgaat
aaaatcaaaaaaatcgtgccgtttttcgctagccttcgcaccatgaaaccggtagaagcc
atcacgtttgctgaaggtaagatgggcttttccgagtatttaaaaaaacgcggcaacgaa
ggaaacaagctggaaaaagggtcggatgacctccgggatgtaaaggttgtcgccaagaaa
tttaagaccatacctgactttctcgctcatgtcgatcatatgcgcgctgctgaaaaaaac
aaaacagcagaaaacggcgtccagcttatgaccgttcaccgttccaaaggattagaattc
aaaacggtctatgtactaggagcggtagacggctcgattccgcacgatttctcgcttgaa
acggcgagaaaaggagacgaaaccgctcttgaagaagaaagaagactgctttacgttgcg
atgacccgggcagaacagcatttgtatatttcctgtccggcaaatcgacggggaaaaacc
gctcaccgctccagatttttgcagccgcttatgcagctgaacaaacgatcgtccttacac
aaataa
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