Bacillus atrophaeus: BATR1942_04435
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Entry
BATR1942_04435 CDS
T01339
Name
(GenBank) ATP-dependent DNA ligase subunit
KO
K10979
DNA end-binding protein Ku
Organism
bae
Bacillus atrophaeus
Pathway
bae03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BATR1942_04435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bae03400
]
BATR1942_04435
DNA repair and recombination proteins [BR:
bae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BATR1942_04435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
Motif
Other DBs
NCBI-ProteinID:
ADP31841
LinkDB
All DBs
Position
complement(867580..868464)
Genome browser
AA seq
294 aa
AA seq
DB search
MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKECHAPIKYEKKCTSCEKTLAPDEI
VKGYEYVKGKYVILTDEELKELKQEHEEKAVEIVDFVQLKEIDPIYFNRSYYVGPGDNGS
KAYTLLREALRTTEKIGIATITIRSKQQLAVLRVYENCILMESIHYPDEVRSAAHVPGVP
DQSNVNDKELQTAITLIDELTTDFQPEQYEDTYRKAIMQKINDKLENKETAVTPGTAAPR
EDVIDLVSALQASIDRTKRPKQDKAASPPATPAAPKGAGEKKRKTTRKKASGTS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgatgtggaagggctctatcagcttcggccttgtcaatattccgatcaagctc
tacgcagccacggaagacaaggatattaaattgcgcagccttcataaagagtgccacgcg
ccgatcaaatatgaaaaaaaatgcacgagctgcgaaaagactctcgctcccgatgaaatc
gttaagggatatgaatatgtgaagggcaaatatgtcattcttacagatgaagagctgaaa
gaattaaaacaggaacacgaagaaaaagcagtcgagatagtcgattttgttcagctgaag
gaaattgatccgatctattttaaccgctcttattatgttggacccggcgataatggctca
aaagcctacactctccttcgggaagcactgaggacgaccgaaaaaatcgggatcgcaacc
attacaattcggtctaaacagcagcttgccgttctccgtgtgtatgaaaattgtatcctg
atggaatccattcattatccggatgaagtcagaagcgctgcccatgtgcccggtgttcct
gatcaatcgaatgtaaatgataaagaattgcaaacggccatcacattaattgatgagctg
acaactgattttcagcctgaacaatatgaagatacctaccggaaagccatcatgcaaaaa
ataaacgacaagctggaaaataaagaaacagccgtcactcctggtacagccgctcctcga
gaagacgtgatcgatttggtcagcgctcttcaggcaagcatcgaccggactaaacggccg
aaacaagacaaagctgcttctccgccagcaacgcctgccgcaccgaaaggagccggagaa
aaaaagcggaaaacgactagaaaaaaagcctccggcacatcataa
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