Bacillus atrophaeus: BATR1942_05650
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Entry
BATR1942_05650 CDS
T01339
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bae
Bacillus atrophaeus
Pathway
bae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BATR1942_05650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bae03400
]
BATR1942_05650
Enzymes [BR:
bae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BATR1942_05650
DNA repair and recombination proteins [BR:
bae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BATR1942_05650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
ResIII
DEAD
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
PIF1
T2SSE
ATPase_2
AAA_19
HypA
Cas3-like_C_2
AAA_30
nSTAND3
TrwB_AAD_bind
HTH_27
Zn_ribbon_ISL3
IBR_1
Motif
Other DBs
NCBI-ProteinID:
ADP32084
LinkDB
All DBs
Position
1102727..1105144
Genome browser
AA seq
805 aa
AA seq
DB search
MNFAEVIVDVSTKNIDRPFDYKIPENLKGMIKTGMRVIVPFGPRKIQGFVTAVKETSDLA
GKSVKEVEDLLDLTPVLTKELMDLSSWLSDKTLSFKITALQAMLPAALKAKYEKELKISG
DDPLPPQIERLFSERKSLLYSDIPDRETLKLIQKCVQKGNIDVTYQVKQKTNKKMIRMIQ
AKVPKEELAKQAAGLSQNASKQQAALHFFISGQEGLKLSAADLCKKTNTSAATLKTLIQK
GLLQESHEEVYRDPYQDRMFKKTKPLALTDEQSAAYESIRETLDQDEHKVFLLHGVTGSG
KTEIYLQSIEKVLAKGKEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHSGLSTGEKYDEW
RKIHRNEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQEEMPRYHAKEVAIKRAEHHS
CPVVLGSATPTLESFARAKKGVYELLSLKSRVNQQVMPEVSLVDMREELRGGNRSMFSLE
LMEQLEETIAKGEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQRLKCHYC
GHEEPVPNTCPECGSEHIRFFGTGTQRVEEELTKVLPNARVIRMDVDTTSRKGSHEKLLS
AFGEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRSAEKTFQLLTQVSGRAG
RHEKLGRVIIQTYTPSHYSIQLTKTHDYESFFQQEMGHRREQSYPPYYYLALVTVSHEEV
AKTAIIADKIAHYLKANCGADTKILGPAASPIARIKDRYRYQCVIKYKQENQLSEVLKKI
LEHYKRDIEQKHVTISIDMNPYMMM
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgcagaagtcatcgtggatgtcagcacaaaaaacatcgacaggccctttgat
tacaaaattccggaaaatctaaaagggatgatcaaaacaggcatgcgtgttattgtcccg
tttggtccccgtaaaattcaaggctttgtgactgctgtcaaagaaacttctgatctcgca
ggaaagtctgtcaaggaagtagaggatttattagacctgacgcccgttctgacaaaagag
cttatggatctgtcctcgtggctgtcagacaaaacactctcatttaaaataacagcgctt
caggctatgctgccggcggcactaaaggcaaaatatgaaaaggaattgaaaatatcgggt
gatgacccgcttccaccgcaaattgagcggctgttttccgagcgtaagagcctgttatat
tcagatattcccgaccgcgagacgctaaagctcatccaaaaatgtgttcaaaagggcaat
atagatgtcacatatcaagtaaagcaaaaaacgaataaaaagatgatcagaatgatacag
gcaaaagtgccgaaagaggagcttgccaagcaggctgccgggctgagtcaaaacgcctcc
aaacagcaggcggctcttcattttttcatctccggccaggaaggattaaagctttctgcg
gcggatctttgcaaaaagacaaatacaagcgcggccacactgaaaaccctcatccaaaag
ggattgcttcaggaaagccatgaagaggtttacagagatccatatcaggacagaatgttc
aaaaaaacgaagccccttgcgctgactgatgagcaaagtgcagcatacgaatcgatacgg
gaaacgcttgatcaagacgagcataaagtatttctgcttcatggcgttacgggaagcggt
aaaacagagatttatttgcaatcaattgaaaaagtgcttgcgaaaggaaaagaggcgatc
gtgcttgtcccggaaatttcgctgacgccgcaaatggtcaaccggtttaaaggccgtttc
ggctcccaggtcgccgttatgcacagcgggctgtccaccggagaaaaatatgatgaatgg
cgaaaaatccaccgaaacgaagtccgtcttgtagtaggcgccaggtcagccattttcgct
ccgtttgaaaatcttggcatgatcattatcgatgaagaacatgaatcatcctataagcag
gaggaaatgccgcgttatcatgcgaaagaggtggccatcaaacgagctgagcaccatagc
tgtccggtcgttttgggaagcgccacaccgacactggaatcatttgcccgtgcgaaaaaa
ggagtttatgagcttttgtcattaaagagccgtgtcaatcagcaggtgatgcctgaagtt
tctcttgttgacatgagggaagagctcagaggcggcaaccgctctatgttttccttagaa
ctgatggaacagcttgaggaaacgatcgcaaagggtgagcaggcggtgctgtttctaaat
aaacggggctattcttcatttgtcatgtgccgtgactgcggttatgttccgcaatgtccg
cactgtgatatttccatgacctatcatcgttacggccagagactcaaatgccattattgc
ggtcatgaagaaccggttccgaatacttgtccggaatgcgggagcgagcatatccgtttt
ttcggaacgggaacgcagagagtggaagaagaactgacaaaggtgttgccgaatgcgaga
gtgatacggatggacgtggacacgacgtcgaggaaaggatctcatgaaaagctattatca
gctttcggggaaggaaaagcggacattcttctcggtacgcagatgattgcaaaggggctt
gattttcccaatgtgacccttgtcggcgttctcagcgctgacacaacacttcatatccct
gatttcagatcagccgaaaaaacctttcagctattaacacaagtaagcgggagggccggc
cggcatgaaaaactgggccgggtgatcattcagacatataccccgtcccattacagcatt
cagctgacaaaaacacatgactatgaatctttctttcagcaggaaatggggcacaggaga
gaacagtcctaccctccgtattattatttggcccttgtgactgtttcccatgaggaagtg
gcaaaaacggcaatcatagccgataaaatcgcccattatttaaaagcgaactgcggcgct
gacacgaaaatcctcggacccgccgcgtcgccgattgccaggatcaaagatagatatcgc
tatcaatgcgtgataaaatacaaacaggaaaaccagttgtcagaagtattaaagaagata
ctggaacattataaacgcgatattgaacaaaagcatgtaacgatttcaattgatatgaat
ccttatatgatgatgtaa
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