Bacillus atrophaeus: BATR1942_06135
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Entry
BATR1942_06135 CDS
T01339
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bae
Bacillus atrophaeus
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bae03016
]
BATR1942_06135 (truB)
Enzymes [BR:
bae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BATR1942_06135 (truB)
Transfer RNA biogenesis [BR:
bae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BATR1942_06135 (truB)
Prokaryotic type
BATR1942_06135 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADP32181
LinkDB
All DBs
Position
1195200..1196129
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AA seq
309 aa
AA seq
DB search
MVNGVLLLHKPVGMTSHDCVMKIRKLLRTKKVGHTGTLDPEVSGVLPICVGRATKIVEYL
TEKSKTYDAEVTLGVSTTTEDQTGETVAAKAVDKSITEAEVTRVLDSLKGRQEQVPPMYS
AVKINGKKLYEYARAGIEVERPKRSITIENIALTSAVKHEGETARFRFTVTCSKGTYVRT
LAVAIGEKLGFPAHMSHLIRTASGAFSLDECFTFEELEAQAEAGTIDEHKVPIERALNHL
PKWVISDTLAKKVENGALLDIPEQFSQLTCEDRIAVFTESGNCLAIYFPHPTKQGLLKPA
KVLVQKSEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacggagttctgcttttacataagcctgtcggaatgacgtctcacgattgtgtg
atgaaaatccgcaagctgttaagaacaaaaaaggtcggacatacgggaacacttgatccg
gaagtatcgggcgtgcttcctatctgtgtcggacgagccactaaaattgtcgaatattta
acggaaaaatcaaagacatacgatgcggaagttactctcggcgtctccacaacaacagag
gatcaaacaggagaaacagtggcggctaaagcggtggacaaaagcataactgaagctgaa
gttacgcgggtgttagacagcttaaagggccggcaagagcaagtccctcctatgtattct
gcagtaaaaataaatggcaaaaaattatacgagtacgcaagagccggaatcgaagtagaa
aggccgaagcgaagcatcacgattgaaaatatcgcgcttacatcagctgttaagcatgaa
ggagaaacagcgcgcttccgattcaccgtcacatgctcaaaagggacgtatgtccgcaca
ttggctgtggcgataggtgaaaagcttggcttcccggctcatatgtcccacctgatccgc
acggcatccggtgctttttcgcttgatgagtgctttacatttgaagagcttgaagcacaa
gcggaagccggcaccatagacgagcacaaggttccaattgaacgggcgcttaatcatttg
ccgaaatgggtcataagtgatacattagctaagaaagtagaaaatggggctttacttgat
ataccagagcaattttctcaattgacctgtgaggaccgaatagctgtctttactgaatcc
gggaattgtttggccatttattttccccatcctacaaaacaagggctgttaaagccggca
aaagtattagtgcaaaaaagcgaacaataa
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