Bacillus atrophaeus: BATR1942_06195
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Entry
BATR1942_06195 CDS
T01339
Name
(GenBank) ribonuclease J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bae
Bacillus atrophaeus
Pathway
bae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BATR1942_06195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bae03019
]
BATR1942_06195
Messenger RNA biogenesis [BR:
bae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BATR1942_06195
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
ADP32193
UniProt:
A0ABN3ZBL5
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All DBs
Position
1207713..1209380
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AA seq
555 aa
AA seq
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MKKKNTENVRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYL
IERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRKSDLR
EIHSKSVITFESTKVSFFKTNHSIPDSVGVSLKTSLGSIVCTGDFKFDQTPALNQSCDIG
EIAKIGNNGVLALLSDSANAERPGYTPSEASVSGEISDAMYNSENRVIIAVFASNINRIQ
QVIQAAAQNGRKLAVAGKNLQSVLQLARKLGYVEADDELFIPVQDVKKYSKREVAIVTAG
SHGEPLAALTRMAKQAHKQLNIEEGDTVVIASTPIPGHELIYSKTVDLLARSGAQVIFAQ
KRVHVSGHGSQEELKLMINLLKPKYLIPVNGEFRMQKAHSKIAEEIGMKRSDIFLIEKGD
VVEFRGQNVKIGDKVPYGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKQKKHL
VSGPEIITRGFVYVRESEGLIIQATELVRSIVTEATETSVVEWSTLKQAMRDALNQFLYE
KTKRKPMIIPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaaaaatacagaaaacgttagaattatcgcccttggaggcgtcggagaaatt
gggaagaacctttatgtcattgaaatagactcagacatatttgtcgtagatgcggggctt
atgcatcctgaaaatgaaatgctcgggatcgatgtcgtgattcctgacatttcttatttg
atcgagcgcgcagaccgcgttaaggctatctttttaactcacggccatgatgagaacatc
ggaggcgtcttttatttactaaacaagttatcagttcctgtttacggaacgaaactgaca
cttgcactgctgcgtgaaaaattaaagcagtacggacacaaccgcaagtcggatttaaga
gaaattcactcaaaatctgtcattacatttgaatcaacaaaagtttcgttctttaaaaca
aatcacagcattcctgattctgtcggagtcagcttaaaaacatcacttggatctattgta
tgcaccggcgactttaaatttgaccaaacacccgcacttaatcaatcttgtgacatcggc
gaaatcgccaaaatcggaaacaacggcgtgctagctttgctttctgacagcgcaaatgct
gaacgccccggttatacaccatccgaggcttctgtcagcggagagatttccgatgcaatg
tataattcggaaaaccgcgtcattatcgccgtattcgcatccaatatcaaccgaatccag
caggtgattcaagccgcagcgcaaaatggcagaaagcttgccgtagccggaaaaaatctt
caatctgttcttcaactggccagaaaactcggttatgttgaagcagatgatgaactattt
attcctgtgcaggatgtaaaaaaatattcaaagcgcgaagtggcgattgtaacagcaggc
agccacggtgaaccgctagccgcccttacaagaatggcaaagcaggcgcacaagcagctg
aatattgaagagggagacaccgttgttatagcctctactccgattccggggcacgagtta
atttattcaaaaaccgttgaccttcttgccagatcaggagcacaggttatctttgcccaa
aagcgcgtgcatgtatcaggacacgggtcacaggaagaattaaagcttatgatcaacctg
ttaaagccgaagtatttaattcctgtaaacggtgaattcagaatgcaaaaggcacattct
aaaatcgcggaagaaatcggtatgaagcgaagtgatattttcttgattgaaaaaggagat
gtcgttgagttccgcggtcaaaatgttaaaataggggacaaggttccttacgggaatatt
ttaatcgacgggcttggtgtcggtgatatcggcaacatcgtcttaagagaccgccgcttg
ctttctcaagacggaatcttaatcgtggtgattacgctggataaacaaaagaaacatctt
gtatccggtccggaaatcatcacaagaggttttgtctatgtaagagagtcagaagggctg
attatacaggcgactgaacttgtgcgctcaattgtaacagaggcgactgaaacatccgtc
gttgaatggtcgacgcttaagcaagccatgcgtgacgcattgaaccaattcctttatgaa
aaaacaaaacgtaaaccgatgattattcctattattatggaagtgtaa
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