KEGG   Bacillus atrophaeus: BATR1942_06195
Entry
BATR1942_06195    CDS       T01339                                 
Name
(GenBank) ribonuclease J2
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bae  Bacillus atrophaeus
Pathway
bae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BATR1942_06195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bae03019]
    BATR1942_06195
Messenger RNA biogenesis [BR:bae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BATR1942_06195
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2
Other DBs
NCBI-ProteinID: ADP32193
UniProt: A0ABN3ZBL5
LinkDB
Position
1207713..1209380
AA seq 555 aa
MKKKNTENVRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYL
IERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRKSDLR
EIHSKSVITFESTKVSFFKTNHSIPDSVGVSLKTSLGSIVCTGDFKFDQTPALNQSCDIG
EIAKIGNNGVLALLSDSANAERPGYTPSEASVSGEISDAMYNSENRVIIAVFASNINRIQ
QVIQAAAQNGRKLAVAGKNLQSVLQLARKLGYVEADDELFIPVQDVKKYSKREVAIVTAG
SHGEPLAALTRMAKQAHKQLNIEEGDTVVIASTPIPGHELIYSKTVDLLARSGAQVIFAQ
KRVHVSGHGSQEELKLMINLLKPKYLIPVNGEFRMQKAHSKIAEEIGMKRSDIFLIEKGD
VVEFRGQNVKIGDKVPYGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKQKKHL
VSGPEIITRGFVYVRESEGLIIQATELVRSIVTEATETSVVEWSTLKQAMRDALNQFLYE
KTKRKPMIIPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
ttgaaaaagaaaaatacagaaaacgttagaattatcgcccttggaggcgtcggagaaatt
gggaagaacctttatgtcattgaaatagactcagacatatttgtcgtagatgcggggctt
atgcatcctgaaaatgaaatgctcgggatcgatgtcgtgattcctgacatttcttatttg
atcgagcgcgcagaccgcgttaaggctatctttttaactcacggccatgatgagaacatc
ggaggcgtcttttatttactaaacaagttatcagttcctgtttacggaacgaaactgaca
cttgcactgctgcgtgaaaaattaaagcagtacggacacaaccgcaagtcggatttaaga
gaaattcactcaaaatctgtcattacatttgaatcaacaaaagtttcgttctttaaaaca
aatcacagcattcctgattctgtcggagtcagcttaaaaacatcacttggatctattgta
tgcaccggcgactttaaatttgaccaaacacccgcacttaatcaatcttgtgacatcggc
gaaatcgccaaaatcggaaacaacggcgtgctagctttgctttctgacagcgcaaatgct
gaacgccccggttatacaccatccgaggcttctgtcagcggagagatttccgatgcaatg
tataattcggaaaaccgcgtcattatcgccgtattcgcatccaatatcaaccgaatccag
caggtgattcaagccgcagcgcaaaatggcagaaagcttgccgtagccggaaaaaatctt
caatctgttcttcaactggccagaaaactcggttatgttgaagcagatgatgaactattt
attcctgtgcaggatgtaaaaaaatattcaaagcgcgaagtggcgattgtaacagcaggc
agccacggtgaaccgctagccgcccttacaagaatggcaaagcaggcgcacaagcagctg
aatattgaagagggagacaccgttgttatagcctctactccgattccggggcacgagtta
atttattcaaaaaccgttgaccttcttgccagatcaggagcacaggttatctttgcccaa
aagcgcgtgcatgtatcaggacacgggtcacaggaagaattaaagcttatgatcaacctg
ttaaagccgaagtatttaattcctgtaaacggtgaattcagaatgcaaaaggcacattct
aaaatcgcggaagaaatcggtatgaagcgaagtgatattttcttgattgaaaaaggagat
gtcgttgagttccgcggtcaaaatgttaaaataggggacaaggttccttacgggaatatt
ttaatcgacgggcttggtgtcggtgatatcggcaacatcgtcttaagagaccgccgcttg
ctttctcaagacggaatcttaatcgtggtgattacgctggataaacaaaagaaacatctt
gtatccggtccggaaatcatcacaagaggttttgtctatgtaagagagtcagaagggctg
attatacaggcgactgaacttgtgcgctcaattgtaacagaggcgactgaaacatccgtc
gttgaatggtcgacgcttaagcaagccatgcgtgacgcattgaaccaattcctttatgaa
aaaacaaaacgtaaaccgatgattattcctattattatggaagtgtaa

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