Bacillus atrophaeus: BATR1942_08295
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Entry
BATR1942_08295 CDS
T01339
Name
(GenBank) putative ATP-dependent nucleic acid helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bae
Bacillus atrophaeus
Pathway
bae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BATR1942_08295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bae03019
]
BATR1942_08295
03400 DNA repair and recombination proteins [BR:
bae03400
]
BATR1942_08295
Enzymes [BR:
bae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BATR1942_08295
Messenger RNA biogenesis [BR:
bae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BATR1942_08295
DNA repair and recombination proteins [BR:
bae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BATR1942_08295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Helicase_Sgs1
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
ADP32592
LinkDB
All DBs
Position
complement(1677325..1679103)
Genome browser
AA seq
592 aa
AA seq
DB search
MLEKARSLLAHYFGYEKLRPGQEQAIRSVTEAKKNTACIMPTGGGKSICYQIPALLFEGT
TIVISPLISLMKDQVDALEEAGIAAAYINSTQSNQDIQSRLTALKNGSYHLFYITPERLT
SPEFIRILQSITVPLVAIDEAHCISQWGHDFRPSYRNIEILFRELKEKPVIMALTATATP
EVHEDICKQLHIEKENTVYTGFSRDNLTFKVAKGENKDRFIEEYLNRNKLEAGIIYTATR
KEADRICEKLKRQHINAGRYHGGLPDEVRKEQQEQFLNDQIQVMVATSAFGMGIDKSNIR
FVLHYQIPKDMESYYQEAGRAGRDGLDSECILLFSPQDIMVQRFLIEQSASDEGKQKQDL
KKLRQMVDYCHTEDCLQRFILKYFGEVDPAACGQCGNCTDTRQAHDVTKEAQMVLSCMIR
MNERFGKTLIAQVLAGSKNKKVLDNGFSRLSTYGILKHQSVSEISDFIEFLISDDFIQMS
DGTFPTLFVTNKGRNVLLGKEDVVRKEALKAAAITENDALFERLRMLRKQIAAEQGVPPF
VVFSDQTLKEMSGKQPANEEDLLSIKGVGEQKRVKYGKLFLEEIQAYVSETV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaaagcccgatcgctattagcgcattattttgggtatgagaagctgcgcccc
ggtcaggagcaggcgatacggtcagtgacagaagccaaaaagaacacggcctgtattatg
ccgacgggcggcggaaaatctatttgttatcaaattccggctttgctatttgaaggaacg
acgattgtgatttcgcctttgatttccttaatgaaagatcaggtcgatgcccttgaggaa
gccggaatcgcagcggcgtatattaacagcacacaatccaatcaagacattcagagccgc
ttaactgctttgaaaaacggttcttatcatctcttttatattacgccggagcgtttaacc
tcaccggaattcattcggattttacaaagcatcaccgtcccgctcgtggctattgatgaa
gcccactgcatttcgcaatgggggcatgattttaggccaagctacagaaatattgaaatt
ctatttcgtgagttaaaagagaagcctgtcattatggcattaaccgcgacagctactcct
gaggtgcatgaggacatttgcaaacagcttcatattgaaaaggaaaatacggtttatacc
gggttttcccgtgacaatttaacctttaaagtagcaaaaggcgaaaataaagatcgcttt
atagaagagtacctgaacagaaataagcttgaagcaggcatcatttatactgcgacaaga
aaagaagcagaccggatctgtgaaaaactaaaacggcagcatataaacgcaggacgttat
catggtggattgccggatgaagtcaggaaagagcagcaggagcagtttcttaatgaccaa
atccaagtgatggtcgcaacgtctgcttttggtatgggcatcgacaaatccaatatcaga
tttgttttgcattatcaaattccaaaagatatggaaagctactatcaagaggcgggaagg
gcaggccgtgacgggcttgacagtgaatgtatccttctgttttcaccgcaggatattatg
gtgcagcgctttttaatcgaacaatcggcatcagatgaaggaaagcaaaagcaggatctg
aagaaactgaggcaaatggttgattattgccacacagaagattgcttgcagcgatttatt
cttaaatatttcggtgaggttgatccggcagcctgcggacaatgcggcaactgtacagat
acaaggcaagcgcatgacgtcaccaaagaagcgcaaatggtattatcgtgtatgatacgt
atgaatgaacgattcggcaaaaccctgatcgctcaggtgctggcgggctcaaaaaacaaa
aaagtgctggataacgggttcagccggctatcgacgtacgggattttaaagcatcaatct
gtatctgaaatcagcgattttatcgagtttctgatttctgatgactttattcaaatgtca
gacggtacgtttccgactctttttgtaaccaataaaggaagaaacgtgctgcttggaaaa
gaggacgttgtcagaaaagaagcgctcaaagcggctgcgattactgaaaatgacgccttg
tttgagcggcttcgcatgcttcgaaagcaaattgccgcagaacaaggcgtcccgccattt
gtcgttttttctgatcaaacgctaaaagaaatgtcaggcaagcagcctgcgaatgaagag
gatcttctttcaattaaaggagtgggagaacaaaaaagggtgaaatacggcaagcttttt
ttagaagaaattcaagcttacgtaagtgaaacagtataa
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