Bacillus atrophaeus: BATR1942_10880
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Entry
BATR1942_10880 CDS
T01339
Name
(GenBank) ATP-dependent RNA helicase; cold shock
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bae
Bacillus atrophaeus
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bae03019
]
BATR1942_10880
03009 Ribosome biogenesis [BR:
bae03009
]
BATR1942_10880
Enzymes [BR:
bae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BATR1942_10880
Messenger RNA biogenesis [BR:
bae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BATR1942_10880
Ribosome biogenesis [BR:
bae03009
]
Prokaryotic type
rRNA helicases
BATR1942_10880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADP33107
UniProt:
A0ABN3ZFP7
LinkDB
All DBs
Position
complement(2114379..2115695)
Genome browser
AA seq
438 aa
AA seq
DB search
MKETKFELYDLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKRESVIGQSQTGTGKTHAYLL
PLLNEIDPNKDVVQAVITAPTRELANQIHQEALKITESMTDDSIRSKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKEQALNVYKAKSLVIDEADLMLDMGFIADVDYIGSRMPED
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQITAEKIEHVLIPSKHRDKDKLLFDIM
SHQNPYLGIVFANTKNTADHIASYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQAMTIYELSDEDALVKL
EKMGIVFEYVELEKGEWKKGDDRQRRKNRKKTPNEADEMAQRLVKKPKKVKPGYKKKMSY
EMEKIRKKQRRQQSKRGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacaaaatttgaattgtatgatctgaaaccgtttattatagatgccgtacat
cgccttggtttttatgagccgactgatattcaaaaaaggctgatacctgctgtgttaaaa
agagaaagcgtgattgggcaatctcagaccggtacaggaaagactcacgcttatttattg
cctttgttaaatgaaattgatccgaataaggacgttgttcaggccgttattacggctccg
acaagagagcttgccaaccagattcatcaggaagccctgaaaattacagaaagcatgaca
gacgattctatccgttcgaaatgctttatcggaggcacggataaacaaaaatcaattgat
aagctgaagacacagccacatctggttgtcggaaccccgggacggattgctgatttaata
aaagagcaggcgttaaacgtttataaggctaaatcacttgttattgatgaggcagattta
atgcttgatatgggttttatagctgatgttgattatatcggatcacgtatgccggaagat
ttgcaaatgcttgttttctccgcgacgattcctgaaaaactgaagcctttcttgaaaaag
tatatggaaaatccgaaatacgcgcatgtggagccgaagcaaatcactgcagaaaagatt
gagcatgttctcatcccttcaaaacaccgtgataaggacaagttgctctttgacatcatg
tcccatcaaaatccgtatcttggcattgtatttgccaatacaaaaaatacggcggaccat
attgcttcatacttaacaggcaaagggatgaaaatcggtcttcttcacggcgggctgacg
cctcgtgagcgtaaaaaagtaatgaagcagattaacgatctggagttcacatatgtcatc
gcgacagaccttgcagctagagggattgatattaagggtgtgagccacgttatcaactat
gagctgccggatgatcttgatttttatgttcaccgtgtaggaagaacggcgcgtgccgga
tcttcaggccaagcgatgacgatttatgagctgtctgatgaggatgcgcttgtcaaactg
gagaaaatgggcatcgtatttgagtatgttgagcttgaaaaaggcgaatggaaaaaaggc
gacgaccgccagcgccgtaaaaaccgtaaaaagacgccgaacgaagctgacgaaatggca
cagcgccttgtgaaaaagccgaaaaaagtaaaaccgggctataaaaagaaaatgagttat
gagatggagaaaataagaaaaaaacaaagaagacagcaatctaaaagaggaaagtag
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