Bacillus atrophaeus: BATR1942_11465
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Entry
BATR1942_11465 CDS
T01339
Name
(GenBank) putative exonuclease with DNA/RNA helicase motif
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bae
Bacillus atrophaeus
Pathway
bae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BATR1942_11465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bae03400
]
BATR1942_11465
Enzymes [BR:
bae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BATR1942_11465
DNA repair and recombination proteins [BR:
bae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BATR1942_11465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
HHH_5
UvrD-helicase
UvrD_C
AAA_16
AAA_12
nSTAND3
T2SSE
NPHP3_N
AAA_28
NTPase_1
AAA
TsaE
ABC_tran
Zeta_toxin
DEAD
AAA_5
AAA_17
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADP33224
LinkDB
All DBs
Position
complement(2224102..2226495)
Genome browser
AA seq
797 aa
AA seq
DB search
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPAL
QEEETYTFYGKTATHPKFGLQFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVK
KLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQGLEQIMISLNQFGFGPQLSMK
IYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPS
LYYAEQNVAKRVRHIASQTEYEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSP
MLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDEVFPFVLAAPTGRAAKRMSES
TGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLT
APTKDRSFIRCGSLQIKEVVEKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGI
LNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDIGEITSIFYAKENTEKEDMAV
VSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDAN
IGMEGITPFDFMKEKHS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcagcatccggatcagctgaaaatggaggaagaaccctttttaaaaggtgcggta
accactgtcatttatcataatgatgccaatttatatacagttttgaaagtgaaagtcaca
gagacctccgaagcgattgaagataaagtcgtatccgtgacgggctacttccctgcgctg
caagaagaagagacctacacgttttacggaaaaacagccacccatcctaaattcgggctc
cagtttcaagcggagcactttaaaaaagagatcccgactacgaaggaagggatcatccaa
tacttatcaagtgatctgttcgaaggaatcggaaagaaaacggctgaagaaatcgtcaaa
aaactgggagacagcgctcttaatcgaattctcgctgactcctcagtgctttacgatgtg
ccgaagctgtcaaaaaagaaagctgatacgctggcaggagctcttcagcggcatcagggc
ctggaacaaattatgatctcgctgaaccagttcggattcggtccgcagctttcaatgaaa
atttatcaggcatatgaatcggaaacacttgagaagattcaagaaaatccgtatcagctt
gtgaaagatgtggaaggcatcgggtttgtgaaagccgatgaactcggggggagaatgggg
atttccggcaatcaccctgagcggattaaagcagcgattttgtattccattgaaacgaca
tgtctttcagaagggcatacgtacatagaaacaaagcagcttattattgatacgcaaaag
cttttgaaccaatcatcagaaggacagctggtgacagagatggacgcagcgaatgaaatc
atcgcgcttggcgaaaataaagctatcatgattgaggatgaccgctgttactttccatct
ttatattatgcggaacaaaacgtagccaagcgtgtccggcatatcgcaagccaaactgag
tatgaagaccaatttcctgaatctgagtttttactcgcgctcggtgatctcgaagagcgt
acgaaagttcagtatgcggcaagccaaaaagaagcgattcaaaaagcgctctcgtccccg
atgcttctgttaacgggaggacccggcaccggaaaaaccactgttatcagagggattgtg
gagttatacagtgagcttcacggcgcttcgcttgatccgtccgattataagaaagatgaa
gtttttccgtttgttttggctgcgccgacaggaagagcggcaaaacgaatgagtgagtcg
accggacttccggccgtcacgattcacaggctgcttggctggaacggggctgaagggttt
actcatacagacgaaaatccgattgaaggaaagctgttaattatagacgaagcgagtatg
cttgatatatggctcgcaaaccatttgtttaaagcgatacccgatcatattcaaattatt
atagttggggatgaggaccagcttccttctgtcgggccgggacaggtgctgcgggatctg
ttggcttcacaggtcattccgacagtcaggctgacggatatttaccggcaggcggaaggt
tcatctattgtggagcttgctcatgacatgaaaaaaggcttgcttccggctaacctgaca
gcgccgacgaaggatcgttcctttattcgctgcggctcattacaaatcaaagaagttgtt
gaaaaggtcgtcaccaatgcgctgaaaaaaggctacacagcaagggatatacaggtgctg
gctccgatgtacagaggaaaagcaggcattaatgagcttaatgtgctgctgcagggcatc
ttaaatccgccgaaagaaaaacggcgcgaaattaaattcggcgatgttgtttatagaacc
ggcgataaaattttacagcttgtgaatcagccggaaaataatgtgtttaatggtgatatt
ggtgagattacatccattttctacgcgaaggaaaatacagaaaaagaagatatggcggtt
gtttcctttgacggaaatgaaatgaccttcaccaaaaaagacttcagccagtttacgcac
gcctattgctgctccattcataaatctcaaggcagtgaatttccgatagtcgtgcttccc
gttgtaaaaggctattatcgaatgctgagaagaaatctcctctatacggcaattacaaga
gcgaaaaagtttctcattttatgcggtgaagaggaagcgctggagtggggcgtgaaaaat
aatgatgcgacagtcagacaaacctctttacaaagaaggctgacgctgcaggctgaggaa
atggatgaagaacttaaagctcttcaaaaagagctgccgtttagcgtatacgacgcaaat
atcggcatggaaggcattacaccatttgatttcatgaaagaaaaacatagctaa
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