Bacillus atrophaeus: BATR1942_17575
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Entry
BATR1942_17575 CDS
T01339
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bae
Bacillus atrophaeus
Pathway
bae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BATR1942_17575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bae03019
]
BATR1942_17575
03009 Ribosome biogenesis [BR:
bae03009
]
BATR1942_17575
Enzymes [BR:
bae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BATR1942_17575
Messenger RNA biogenesis [BR:
bae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BATR1942_17575
Ribosome biogenesis [BR:
bae03009
]
Prokaryotic type
rRNA helicases
BATR1942_17575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
ADP34432
UniProt:
A0ABN3ZFV8
LinkDB
All DBs
Position
complement(3427825..3429270)
Genome browser
AA seq
481 aa
AA seq
DB search
MSKISFKDYTLSAEIVRALEGLGYMSPTEVQQKVMPQALEKKDLVVKSQTGSGKTAAFGI
PICEMADWDENKPQALILTPTRELAVQVKEDITNIGRFKRMKAAAVFGKSPFDKQKAELK
QKTHIVVGTPGRVLDHIEKGTFPLERLKYLVIDEADEMLNMGFIEQVEAIIKHLPRDRMT
MLFSATLPEDVEQLSRKYMKNPEHIEIKAAGLTTKHIEHSVIEVREDHKFSLLKDVLVTE
NPDSCIIFCRTKENVDKLSEELDALDYPCDKIHGGMVQEDRFDVMNEFKRGEFRYLAATD
VAARGIDIENITHVINYDLPLEKESYVHRTGRTGRAGNQGKAITFVTPYEKRFLAEIEAY
IGFEIPQAEAPSREEVSRKKPAFLEKLNDRPTVKKDKSEQLNKDIMKLYFNGGKKKKIRA
VDFVGTIAKIDGVTADDIGIITIQDNVSYVDILNGKGPLVLKVMKKTTVKGKLLKVNKAN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatcagttttaaagactatacattaagcgctgaaattgtaagggcgttggaa
ggcttaggctacatgagcccgacagaagtacagcaaaaggtaatgcctcaagcccttgaa
aaaaaggaccttgtcgtgaaatcacagacgggaagcgggaagacggcggcgtttggcatt
ccgatttgtgaaatggcggattgggacgagaataagccgcaagcgctgatcttgacgccg
acccgtgaactcgcggttcaagtgaaggaggatatcacaaatatcggccgttttaagcga
atgaaggcggcggctgtttttgggaagtccccttttgacaaacaaaaagccgaactgaag
caaaaaacccatatcgtcgtcgggacgccgggacgtgtgctggaccatatagaaaaagga
acgtttcctttagaacgtctgaagtatctggtgattgatgaagccgatgaaatgctgaat
atgggattcattgagcaggtagaggcgattattaagcatttgccgcgcgaccgaatgacc
atgctgttttcagccacacttcctgaggacgtagaacagctttcacgcaagtacatgaag
aacccggagcacattgaaatcaaagccgccggcctgaccaccaaacatattgaacattcg
gttattgaagtcagagaagatcataaattctcccttctcaaagacgttctcgtgacagag
aatccggacagctgtatcatattctgccggacaaaagagaatgtggacaagctgtctgaa
gaattggatgctttggactacccttgcgataagattcacggcggcatggtgcaggaagac
cgatttgatgtcatgaacgaattcaaaagaggcgagttcagatatttagcggcgactgat
gtggcagcaagaggcattgacattgaaaatatcacacacgtcatcaactatgatctgcct
cttgagaaagaaagttatgtgcaccggacgggtagaacgggacgcgcaggcaaccaagga
aaagcgatcacatttgtcacgccgtatgaaaagagatttttagctgaaattgaggcctac
atcggatttgaaattccgcaagccgaggctccttccagagaagaagtctccagaaagaaa
ccggcatttcttgaaaaattgaatgaccggccgacggttaaaaaggataagagtgagcag
ctaaataaggatattatgaagctgtattttaacggcggaaagaaaaagaaaatcagagcg
gttgacttcgtaggaacgattgccaaaattgatggtgtgacagcggacgatatcgggatt
ataacgatacaggacaatgtctcctatgttgatatcttaaacggcaaaggcccgcttgtc
ttaaaggtcatgaagaaaacgactgtaaaagggaaattgctgaaagttaataaagcgaat
aaataa
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