Bacillus atrophaeus: BATR1942_19150
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Entry
BATR1942_19150 CDS
T01339
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bae
Bacillus atrophaeus
Pathway
bae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BATR1942_19150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bae03021
]
BATR1942_19150
03400 DNA repair and recombination proteins [BR:
bae03400
]
BATR1942_19150
Enzymes [BR:
bae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BATR1942_19150
Transcription machinery [BR:
bae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BATR1942_19150
DNA repair and recombination proteins [BR:
bae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BATR1942_19150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ADP34747
LinkDB
All DBs
Position
3748435..3752034
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGSKFQASMGAEAINKLLQ
DIDLVKEVDTLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTDEQRSKLLITTVGKLIFNEILPESFPYMNEPTKSNIEEKTPERFFLEKGA
DVKAVIEQQPVNAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFRYSTKAGITVGV
SDIVVLDDKQEILEEAQGKVDNVLKQFRRGLITEEERYERVISIWSSAKDVIQGKLMQSL
DEVNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLREGTEIIERLE
ERLIGRFSRKQVRHPETDEVLVNENELIDEDKALEIVESGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARHPKGQATISEIDGKVAEINEVRDKQQEVVIQGAVETRSYTAPYNSRLKVTVGDEITR
GQVLTEGSIDPKELLKVTDITSVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGSLLDIHQFTEANKKVLLKGDRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVQPISKVQPTDDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccggataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggcctgttttgcgaacgcattttcggaccaactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgttgtttgtgaccgttgcggagtt
gaagtaacgagggctaaagtccgtcgtgagagaatggggcatattgaacttgctgcccct
gtttctcacatttggtatttcaaaggaatcccaagccggatgggacttgtactggatatg
tcaccgcgtgcattggaagaagtgatttactttgcttcttacgttgttacagacccggca
aacacaccgcttgaaaagaaacagcttttatctgaaaaggaataccgtgcgtatcttgat
aaatacggcagcaaattccaagcgtcaatgggtgcggaagcgattaataagcttcttcaa
gacattgatctggtaaaagaagtggacacgttaaaagaagagctgaaaacatctcaagga
cagcgccgtacgcgtgcgatcaaacgccttgaagtattggaagccttccgtaactcagga
aacaagccttcatggatgatccttgacgtgcttcctgttatcccgcctgagcttagaccg
atggttcagcttgatggcggacgttttgcgacgtctgacttgaacgacctttaccgtcgt
gttatcaaccgtaacaaccgtttaaaacgtcttttggatcttggtgcgccaagcatcatc
gttcaaaacgaaaaacgtatgctgcaagaagctgtcgatgctttaattgataacggacgc
cgcggacgacctgttaccggtcctggtaacagaccgttgaaatctttatcacatatgctg
aaagggaaacaaggacgtttccgtcaaaaccttcttggtaaacgtgtcgattactccgga
cgttctgtaatcgtcgtaggtcctcatttgaaaatgtatcaatgcggtctgccgaaggaa
atggcgcttgaactcttcaaacctttcgtcatgaaagagcttgtcgaaaaaggccttgca
cataatattaaaagcgcaaaacgtaaaattgagcgagtacagcctgaagtatgggatgta
ttagaatcagtcattaaggagcatccggttcttttaaaccgtgcacctacgcttcacaga
ctcggaattcaggcgttcgaaccaacacttgttgaaggtcgcgcaatccgtcttcatccg
ctcgtatgtacagcttataacgctgactttgacggagaccaaatggcggttcacgttccg
ttatctgcagaagcacaagctgaggctcgtattcttatgcttgctgctcaaaacatcttg
aaccctaaagatggtaaaccggttgttacaccgtctcaggatatggtattaggaaactac
tacttaactcttgagcgtgccggagctgtcggtgagggtatggtctttaaaaatacagat
gaggcgcttcttgcttatcaaaacggatatgttcatcttcatacgagagtagctgttgca
gctaactcacttaagaacgtgacatttaccgatgagcagcgatcaaaactgttaattaca
accgttggaaaacttattttcaatgaaattcttcctgaatcattcccttatatgaatgag
cctacgaagagcaatattgaagaaaagacacctgagcgcttcttcttagaaaaaggtgcc
gatgtaaaagctgtgatcgaacaacagcctgtcaacgcaccgtttaagaaaggcatttta
ggtaaaatcattgcggagatctttaaaagattccacattaccgaaacatctaaaatgctt
gaccgtatgaagaaccttggcttcagatattcaacaaaagccggtattacagtaggggtt
tccgatatcgtcgttcttgatgataaacaagaaatccttgaagaagcacagggcaaagtt
gacaatgtgttgaagcagttcagacgtggtctgattacggaagaagaacgttatgaacga
gtgatttcaatttggagttcggctaaagatgtaatccaaggtaaactgatgcaatcatta
gatgaagtcaacccgatttacatgatgagtgactcaggtgcccgtggtaacgcatctaac
tttacgcagcttgcgggtatgcgtggtctgatggccaacccggctggacgaatcattgaa
ttaccgatcaaatcaagtttccgtgagggtcttactgtattggaatactttatctctact
cacggtgcacgtaaaggtcttgctgatacagccttgaaaacggctgactcaggttacctt
acacgtcgtcttgttgatgttgcacaggacgttatcatccgtgaaacagattgcggaact
gaccgaggtattttggctaaaccgcttagagaaggcactgaaattatcgagcgcttagaa
gaacgtcttatcggccgtttctctagaaaacaagtaagacatcctgaaacagatgaagtg
cttgtgaacgaaaacgaactgattgatgaagataaagctctcgaaattgttgaatctggt
attgaagaagtctggatccgttccgcgtttacatgtaacacgcctcatggtgtgtgtaaa
cgatgctacggccgaaatcttgctacaggcactgatgttgaggttggagaagcagtcgga
atcatcgctgcccaatctatcggagagcctggtacacagttaacaatgcgtaccttccat
acaggcggggttgcaggagacgatattacacaaggtcttccgcgtatccaagagcttttc
gaagcgcgtcatcctaaaggtcaagcgacaatttctgaaattgacggtaaagttgccgaa
attaatgaagtccgtgataagcagcaggaagttgtgattcaaggcgcggttgaaacacgt
tcgtatacggctccttataattctcgccttaaagttacggttggagatgaaattactcga
ggccaagttctgacagaaggatcaattgatccgaaagaacttctcaaagtaactgatatt
acatcagttcaagagtatcttcttcatgaggttcaaaaggtttaccgtatgcaaggtgtg
gaaatcggtgataaacacgtagaagtaatggttcgccaaatgcttcgcaaagtccgtgta
attgatgccggagatactgatgtacttcctggctcattgcttgatattcaccaatttact
gaagcgaacaaaaaagtattgcttaaaggcgatcgtccagctactggccgtcctgtctta
ctcggtattacaaaagcttcgcttgaaactgactcattcttatcagctgcttccttccag
gaaacaacacgtgtccttacagatgcagcaattaaaggtaagcgtgatgaacttctcggc
ctgaaagaaaatgttatcatcggtaaacttgttccggctggtacaggtatgatgaaatac
cgaaaagtacagccgatttcaaaggtacagccgactgatgatatggtgccggttgaatag
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integrated database retrieval system
