Burkholderia aenigmatica: L3V59_02870
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Entry
L3V59_02870 CDS
T09543
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
baen
Burkholderia aenigmatica
Brite
KEGG Orthology (KO) [BR:
baen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
baen03016
]
L3V59_02870
Enzymes [BR:
baen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
L3V59_02870
Transfer RNA biogenesis [BR:
baen03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L3V59_02870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
UKD12033
LinkDB
All DBs
Position
1:587520..589607
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AA seq
695 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMQEADTA
AQQIDLDFLWECAPADEFAYTALAAEYFGATYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQVQYEEELKAGKLPDAFAGKVLGLLTRPDKNAIEYKA
MEAAAGARGVSPARLMLDCGGIASPRALHEARFLAEFFPHGTGFPAVSVGALPDDLPRAD
VQAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQEIVANETRAELVFVKNNLRHNH
LDELVNEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLAQEQKKHVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTSGDAAEEEDDAEGGDDTLIDVEDA
TAETEAEALAEADGAAAGEGGEAAGGNASEEGRAS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagtgtgctgtcgcgccag
ggtgacgcatttcaggtcgagttgcccggcgggcggcgggcgaaggtgcgcgcaaaagac
gtgctgatcgaattcgacaagccggccgcaggcgaactgatgcaggaggccgacacggcc
gcgcagcagatcgatctggatttcctgtgggaatgcgcgccggccgacgagttcgcgtat
acggcgctggccgcggaatacttcggtgcgacgtacggcccggtcgagcgcgcggcgctg
gtgctgcgactgcacggctcgcccgtctacttccgccgcaaggggcgcggccagtaccag
cgcgcgccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtccaggtgcagtatgaagaggaactgaaggccggcaagctgccggacgcattc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaacgcgatcgaatacaaggcg
atggaagcggcggccggcgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgcgtcgccgcgtgcgctgcacgaggcgcgcttcctcgcggagttcttcccgcac
ggcacgggctttccggccgtctcggtcggcgcgctgccggacgacctgccgcgcgcggac
gttcaggcgttctcgatcgacgacatcaccacgaccgaaatcgacgacgcgttctcggtc
gagcacctgtccgatggccgtgtgcggatcggcgtgcacatcgcggcgccggcgctcggc
atcgtgcgcggcgacgcggtcgatgcgatcgcgcgcacgcgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgttgacgtgttcacgctgaaagag
ggcgattaccgcccggcgctgtcgctgtacatcatcgtcaaccgcgaaacgcaggagatc
gtcgcgaacgagacgcgcgccgagctcgtgttcgtgaagaacaacctgcggcacaaccac
ctcgacgagctcgtcaacgaagagacgctcgcggccggcaccggcgactatccgcacaag
gacgacatcgccgtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaggttgcg
cgcgcgggctacggcctgaagcgcgaagtacagcgcaacaccgactacaacttctacgtc
gaaggcgagcacgtgtcgatcacgccgcgccgtcgcgggtcgccgctcgacctgatcgtg
tcggagctcgcgattctcgcgaactcgacctggggcgcgttcctgcacgaccacacggtg
ccgggcatctaccgctcgcagcgaggcttcggcgcgccgggcccgaagcgcacgcggatg
cagacgacggccgcgccgcacgaaggcctcggtgtggcgcagtacgcgtggagcacgtcg
ccactgcgccgctacgtcgacctcgtgaaccagtggcaactgctcgcgtgcgtgcagcat
ggcgtcaccgcgaagctcgccgcaccgttcaagccgaaggacgccgacctgtacgcagtc
gtgcagggcttcgacgacacctatacggcctacgccgactaccagcgccggatggagtat
ttctggtgcctgcgctggcttgcgcaggagcagaagaagcacgtcgtcgcgagcgtcgtg
aagggcgacctcgtgcgcctcgaggaaattccgctgctgctgcacgtgccggggctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgaattgacgatc
gaggcgtcggtgcggttgctgaacgtgctcgacgcgccgaccgtgacgagcggcgacgcg
gccgaggaagaggatgacgccgaaggcggcgacgacacgctgatcgacgtcgaagacgcg
acggccgaaaccgaggcggaagcgctggcggaagcggacggcgcggcggccggtgaaggc
ggcgaagccgcgggcggcaacgccagcgaagaggggcgcgcatcatga
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