Burkholderia aenigmatica: L3V59_10315
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Entry
L3V59_10315 CDS
T09543
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
baen
Burkholderia aenigmatica
Brite
KEGG Orthology (KO) [BR:
baen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
baen03009
]
L3V59_10315 (rlmD)
Enzymes [BR:
baen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L3V59_10315 (rlmD)
Ribosome biogenesis [BR:
baen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L3V59_10315 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
Methyltransf_15
RrnaAD
Methyltransf_23
Methyltransf_11
Methyltr_RsmB-F
PCMT
N6_N4_Mtase
Methyltrans_SAM
Motif
Other DBs
NCBI-ProteinID:
UKD10114
LinkDB
All DBs
Position
1:complement(2201411..2202808)
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AA seq
465 aa
AA seq
DB search
MSEAVPTSARKSRNAPVAPGPAPVLEIESLDMEARGVGRTITEDGEPGKVIFVEGALPGE
RVTYSSFRRKPSYEQATVVDILRPSVMRTQPKCTFFGTCGGCSMQHLDMRAQVAVKQRVL
EDNLWHLAKLRAETMFAPIHGPSWGYRYRARLTVRNVAKKGGVLVGFHEKKSSYVADMTS
CEVLPPHVSAMLVPLRRLVEGLSIRDRMPQIELAVGSEVTALVLRVLEPINADDEALLRA
FADEHKVQFWLQPKGPDTVAPFYPLDVSLDYTLPEFGIRMPFKPTDFTQVNHQINRVLVG
RALRLLAPSRDDRVLDLFCGIGNFTLPLARLSREVMGIEGSDTLTTRALANARENGVDGH
TTFACRNLFEVTGDDMRALGAFDKFLIDPPREGALAVSKALAEIAQSGEGPLPKRIVYVS
CNPSTLARDAGLLVHEAGYRLKGAGVVNMFPNTSHVESIALFERN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaagccgtccccacttctgcgcgcaaatctagaaatgcgcccgtcgcgcccggg
cctgccccggttctcgagatcgaatcgctcgacatggaagcgcgcggtgtcggccgcacg
atcaccgaggacggcgagccgggcaaggtcatcttcgtcgagggggcgctgccgggcgag
cgcgtgacctattcgagcttccgccgcaagccgagctacgagcaggcgacggttgtcgac
attctgcgcccgagcgtgatgcgcacgcagccgaagtgcacgttcttcggcacctgcggc
ggctgttcgatgcagcatctcgacatgcgcgcgcaggtggcggtcaagcagcgcgtgctc
gaggacaacctgtggcacctggcaaagctgcgcgcggaaacgatgttcgcgccgatccac
ggcccgtcgtggggctatcgctaccgtgcacgcctgaccgtgcgcaacgtcgcgaagaag
ggcggcgtgctggtcgggttccacgagaagaagagcagctacgttgccgacatgacgagc
tgcgaagtgctgccgccgcacgtgtcggcgatgctcgtgccgctgcgccggctcgtcgaa
gggctgtcgatccgcgatcggatgccgcagatcgagctcgcggtcggctctgaagtcacg
gcactcgtgctgcgtgtgctggagccgatcaacgcggacgacgaggcgttgctgcgcgcg
ttcgcggacgagcacaaggtgcagttctggctgcagccgaagggccccgatacggtggcg
ccgttctatccgctcgacgtgtcgctcgactacacgctgccggaattcggtatccgcatg
ccgttcaagccgaccgacttcacgcaggtcaaccatcagatcaaccgcgtgctggtgggc
cgcgcgctgcgtctgctcgcgccgtcgcgcgacgaccgcgtgctcgacctgttctgcggg
atcggcaacttcacgctgccgctcgcgcggctgtcgcgcgaagtgatgggcatcgagggc
agcgacacgctgacgacgcgcgcgctggcgaatgcgcgcgagaacggtgtcgacggccac
acgactttcgcgtgccggaacctgttcgaagtgacgggcgacgacatgcgtgcgctcggc
gcgttcgacaagttcctgatcgacccgccgcgcgaaggcgcgctcgcggtgtcgaaggcg
ctggccgagatcgcgcagagcggtgaaggcccgctgccgaagcggatcgtctacgtgtcg
tgcaacccgtcgacgctggcacgcgacgcgggcctgctcgtgcacgaggccggctaccgc
ctgaagggcgccggcgtcgtgaacatgttcccgaatacgtcgcacgtcgaatcgatcgcg
ctgttcgagcgcaactga
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