Burkholderia aenigmatica: L3V59_13530
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Entry
L3V59_13530 CDS
T09543
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
baen
Burkholderia aenigmatica
Pathway
baen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3V59_13530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baen03019
]
L3V59_13530
Enzymes [BR:
baen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L3V59_13530
Messenger RNA biogenesis [BR:
baen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3V59_13530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
aq_1923
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UKD10683
LinkDB
All DBs
Position
1:complement(2859045..2860637)
Genome browser
AA seq
530 aa
AA seq
DB search
MSAGPAGLTHDVPAAPFERNATMSDSVAKPVDATFDQFGLAADILKAIAEQGYTTPTPIQ
AQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRE
LADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTAN
LGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQ
TIEVARSNSTNANVTQIVYDVAEGDKQAAVVQLLRDRALKQVIVFCNSKIGASRLARNLE
RDGVVASAIHGDKTQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFSA
EDYVHRIGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPLEMQTLAIDKPARHRHDER
GNDRGGDRGGERGGDRNSERGGERGGERGGRRERDEHRGASGRRPGGSERGHHRRHEAPV
DDFFLKPYEPSAPAKQQEDAQPAQQPEKKGPKRQVAALLGGFGMPRKPSA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggcccggctggcctgacgcacgatgtccccgccgcgccttttgagcgaaac
gccaccatgtccgattctgtcgccaagcccgtcgacgcaaccttcgatcaattcggcctt
gccgccgatatcctgaaagccattgcggagcagggctatacgacgccgacgccgatccag
gcgcaggccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggc
accggcaagaccgcgagtttctcgctgccgatcatccagcgcctgctgccgcaggccaat
acgagcgcgtcaccggcgcgccacccggtgcgtgcgctgatcctcacgccgacccgcgaa
ctcgccgaccaggtcgccgcgaacgtgcacgcgtatgcgaagcacacgccgctgcgcagc
gcggtcgtgttcggtggcgtcgacatgaacccgcagatggccgaactgcgccgcggcgtc
gagatcctgatcgcgacgccgggccgcctgctcgaccacgtgcagcagaagacggcgaat
ctcggccaggtgcagatcctggtgctcgacgaagccgaccggatgctcgacatgggcttc
ctgcccgatctgcagcgcatcctgaacctgctgccgaaggagcgccagacgctgctgttc
tcggccaccttctcgggcgaaatcaagaagctcgcgtcgacctacctgcgcaatccgcag
acgatcgaggtcgcgcgcagcaactcgacgaacgcgaacgtcacgcagatcgtctacgac
gtcgccgaaggcgacaagcaggcggccgtcgtgcagctgctgcgcgatcgcgcgctcaag
caggtgatcgtgttctgcaacagcaagatcggcgcaagccggctcgcgcgcaacctcgag
cgcgacggcgtggtcgcgtcggcgatccacggcgacaagacgcagctcgagcggatgcag
gcgctcgacgcgttcaagcgcggcgagatcgaggcgctggtcgcgaccgacgtggccgcg
cgcggcctcgacatcgccgagctgccggccgtgatcaacttcgacctgccgttcagcgcg
gaagactacgtgcaccggattggccgtaccggtcgcgcgggcgcgacgggcgacgcgctg
tcgctgtgcagcccgaacgagcgcaagcagctcgccgatatcgagaagctgatcaagcgc
ccgctcgaaatgcagacgctcgccatcgacaagccggcgcgccaccgtcacgacgagcgc
ggcaacgaccgcggcggcgatcgtggcggcgagcgcggtggtgaccgtaacagcgagcgc
ggtggcgaacggggcggcgaacgcggtggccgtcgtgagcgcgacgagcatcgcggcgca
tctgggcgccggccgggcggttccgagcgcggccatcaccgtcgccacgaagcgccggtc
gacgatttcttcctgaagccgtacgagccgtcggcgccggcgaagcagcaggaagacgcg
cagcctgcgcagcagcccgagaagaaggggccgaagcgtcaggtcgccgcgctgctcggc
gggttcgggatgccgcgcaagccgtcggcgtaa
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