Burkholderia aenigmatica: L3V59_15370
Help
Entry
L3V59_15370 CDS
T09543
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
baen
Burkholderia aenigmatica
Pathway
baen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3V59_15370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baen03019
]
L3V59_15370
Enzymes [BR:
baen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L3V59_15370
Messenger RNA biogenesis [BR:
baen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3V59_15370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
Ric8
Sacchrp_dh_NADP
Cas3-like_C_2
DegT_DnrJ_EryC1
CMS1
CARD_2
Motif
Other DBs
NCBI-ProteinID:
UKD11010
LinkDB
All DBs
Position
1:3239520..3240965
Genome browser
AA seq
481 aa
AA seq
DB search
MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYAEHRGAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
QRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQQPRGGGGGGGNRQPRAGGSGQPAAK
RDGNAQPKASQQKAAKPRTQGQGGAGSGGRPAGGGNSTRPANGNAAHPNRNRSSRSGQRG
H
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatctctcggcttggccgaaccgctggtcaaggcggtcaacgagctcggc
tacacgtcgccgaccccgatccagcagcaggcgatcccggccgtcctcggcggcggcgac
ctgctcgccggcgcgcagacgggcaccggcaagaccgccggcttcacgctgccgatcctg
caacgcctgcatacgttctacgcggagcatcgcggcgcgaagcgcgcggtgcgcgcgctg
atcctcacgccgacgcgcgaactcgccgcccaggtcgaggaaagcgtgcgtgcgtacagc
aagtacctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgccgggccgcctgctcgaccac
atgcagcagaagacgatcgacctgtcggatctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccgccg
cagcgccagaacctgctgttctcggccaccttctccgatgagatcaaggcgctcgccgac
agcctgctcgattcgcccgcgctgatcgaagtcgcccgccgcaacacgaccgccgaaagc
gtcgcgcagaagatccacccggtcgaccgcgatcgcaagcgcgaactgctcacgcacctg
atccgcgaacacaactggttccaggtgctcgtgttcacgcgcacgaagcacggcgcgaac
cggcttgccgagcagctgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctggcggagttcaagaacagcacgctgcaggtgctc
gtcgcgaccgatatcgctgcgcgcgggatcgacatcgaccagctgccgcacgtcgtcaac
ttcgacctgccgaacgtgccggaagactacgtgcaccggatcggccgcacgggccgcgca
ggcgcgaccggcgaagccgtgtcgctcgtgtgcgtcgacgaaaagcagctgctgcgcgac
atcgagcggctgatcaagcgcgagattccgcaggaagtgatcgcgggcttcgaacccgat
ccgaacgcgaagccggagccgatccagcagcgccgcgggcagcagcaaccgcgcggcggt
ggcggtggcggcggcaatcgccagccgcgcgcaggcggctcaggccagccggccgcgaaa
cgcgacggcaacgcgcaaccgaaggcttcgcaacagaaagccgcgaagccgcgcacgcaa
gggcaaggcggcgccggcagcggcggacgcccggccggtggcggcaacagcacacgtccg
gcgaacggcaatgccgcgcacccgaaccgcaaccgttcgtcgcgcagcggccagcgcggt
cactga
DBGET
integrated database retrieval system
