Bacillus aerophilus: BAE_03870
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Entry
BAE_03870 CDS
T08735
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
baer
Bacillus aerophilus
Pathway
baer02020
Two-component system
baer02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
baer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BAE_03870 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BAE_03870 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baer03021
]
BAE_03870 (rpoN)
Transcription machinery [BR:
baer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAE_03870 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
MarR_2
HTH_Crp_2
HTH_11
Sigma70_r4
Fe_dep_repress
HTH_21
HTH_6
HTH_Tnp_4
LexA_DNA_bind
MarR
KH_BICC1
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QAR51976
LinkDB
All DBs
Position
complement(730204..731502)
Genome browser
AA seq
432 aa
AA seq
DB search
MSLKLQQELVLKQVLTQELRQAITLLQLNCAELGEYLDQLALENPLIERKDTDSYQPVYH
KRTQDRMTEPYRTHQKESLQMYLKRQAIDLNLSEKNQRIFQFMIESIDSNGYLNEPIDQM
AAALVASAEEVEAVLHQLQSLEPAGIGARSLQECILLQLRRKKDRWYEAELIIEGHFFLF
ARKAWKEIAAKTGIPLKTLQAIQDEVSLLEPRPGLHFCYEDQDVYIEPDVLITATGGHIT
FELNQRAFPDIEMNEGYFAMIQDQKRHEAYTYLKEKQQQYNWLVQALKQRKQTMTNVVRE
IILQQTDFFLTGKHKMKPLTMKRIADILQVHESTVSRTVKGKMVQTPYGLMEMKQFFQAK
LEGHSLEEASSYTVKTHIAELIQSENKKKPYSDQQIMTQLQQTFGIRVSRRTIAKYREQM
NLPSSTLRKRYD
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaaactgcaacaagaactagtattaaagcaggtactcacgcaagaactcagg
caggcgattacgctgctgcaattgaattgtgcagagctgggtgagtatcttgatcagtta
gcgcttgagaaccctctgattgagcggaaagacacggacagctatcaaccagtttatcat
aaaagaacgcaagatcgaatgacagagccgtatcgtacgcatcaaaaagaaagcctgcaa
atgtatttaaagagacaggccattgatttgaatttaagtgaaaagaatcaaaggattttt
caattcatgattgagtccattgattccaatggctatttaaatgaaccgattgaccaaatg
gccgctgctctagtggcttcggcagaagaagtagaagctgttcttcatcagcttcaatca
ttagagcctgccggtattggcgctagatcattgcaagaatgtatcctgctccagcttaga
cgaaaaaaggatcgctggtatgaagcagagctgatcatcgaagggcatttctttcttttc
gcaaggaaggcttggaaggaaatcgcggcaaaaacaggtatacctttgaaaaccttgcag
gccatacaagatgaggtgtcgcttctcgaaccaagaccaggccttcatttctgttatgaa
gaccaggatgtgtatatagaaccagatgtgttgattacagctacgggaggtcacatcaca
ttcgagctgaaccagcgtgcttttccggacattgaaatgaatgaagggtatttcgccatg
attcaagatcaaaagcggcatgaagcatacacgtatttaaaggaaaagcagcagcagtac
aattggcttgttcaagcgctgaagcagagaaaacaaacgatgacaaatgtcgttcgtgag
attatcttacaacagactgattttttcctgacaggaaagcataaaatgaaaccgcttacg
atgaagcggattgcagatatattacaagtgcatgagtcgacagtgagccgaacagtcaaa
ggaaaaatggtgcagaccccttatgggttaatggaaatgaaacagttttttcaagcgaaa
ctagaagggcattcgctagaagaagcatccagctacacagtaaagacgcacattgcagag
ctgattcaatcagaaaataagaaaaaaccatattcggatcagcaaatcatgacgcagctt
caacaaacctttggtatccgtgtctctcgcagaaccattgccaaatatcgtgagcaaatg
aaccttccgtcttccacgctgcggaaacgctatgattaa
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