Bacillus aerophilus: BAE_05665
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Entry
BAE_05665 CDS
T08735
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
baer
Bacillus aerophilus
Pathway
baer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAE_05665 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baer03021
]
BAE_05665 (rho)
03019 Messenger RNA biogenesis [BR:
baer03019
]
BAE_05665 (rho)
Transcription machinery [BR:
baer03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BAE_05665 (rho)
Messenger RNA biogenesis [BR:
baer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BAE_05665 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
NACHT
ATPase_2
AAA_22
Spore_III_AA
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QAR52323
LinkDB
All DBs
Position
complement(1073398..1074681)
Genome browser
AA seq
427 aa
AA seq
DB search
MKDVSISSLENMKLKELYELAKKYKISYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLFPDRQMILETQPNHLSTRIMDMMAPVGFGQRGLIVAPPK
AGKTILLKEIANSISENHPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLVPKEHLDRLWAMRKSMSDTPDFAEKFMRKMRKTKTNQEFFDILTQEWKQA
NMSASRR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatgtttcgatttcatctttggaaaatatgaaattaaaagagctgtatgagtta
gcaaaaaagtacaaaatctcttattacagcaaactaacaaaaaaagaattaatttttgcc
atcttaaaggcaaacgctgagcaagaggatctcttatttatggaaggggttctagaaatt
attcagtcagagggatttggtttcttaagaccaattaactactccccaagctctgaagac
atttatatttcagcttcacaaatcagacgctttgatttaagaaatggtgataaggtgtct
ggaaaggtacgacctccaaaagagaatgaacgctactatggcctccttcatgtcgaagcg
gtaaatggggacgacccagaatcagctaaggaacgtgttcactttcctgcactcacgccg
ctattccctgatcgtcaaatgattcttgaaacacagcctaatcacctgtctactagaatt
atggatatgatggcaccagttgggtttggacagcgtggtttaattgttgcaccgcctaag
gctgggaaaaccattttgctcaaagaaattgccaacagtatctctgaaaatcatccagag
gcagaactgattgttcttcttattgacgaacgtccagaggaagtaacagatatcgaacgt
tctgttgcaggggatgtcgttagctcaacctttgacgaagtaccggaaaaccacattaaa
gtagcagagcttgtattagagcgtgcgatgcgtctagttgaacataaaaaagatgtcatc
atcttaatggacagcatcacaaggcttgctcgggcatacaaccttgtcatcccgccaagc
ggccgaacgctttccggcggtattgatccagcggctttccatcgcccaaaacgtttcttt
ggtgctgcgcgtaacatcgaagaaggtgggagcttgaccattttagctactgcacttgtt
gatacgggatcacgtatggacgatgtgatttatgaagagtttaaaggaacaggaaatatg
gagctccatttagatcgttctcttgcagaaagaagaattttcccagccatcgacattcgt
cgttccggtacaagaaaagaagaactgcttgtgcctaaagagcatcttgatcgtctatgg
gcgatgagaaaatcaatgtcagatacacctgatttcgctgagaaattcatgcgcaaaatg
agaaaaacaaagacaaaccaagaatttttcgatattttaacgcaagagtggaaacaagca
aatatgtctgcatcaagaagatag
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