Bacillus aerophilus: BAE_12880
Help
Entry
BAE_12880 CDS
T08735
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
baer
Bacillus aerophilus
Brite
KEGG Orthology (KO) [BR:
baer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baer03400
]
BAE_12880
DNA repair and recombination proteins [BR:
baer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAE_12880
Archaeal homologous recombinant proteins
BAE_12880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QAR53635
LinkDB
All DBs
Position
2497160..2500555
Genome browser
AA seq
1131 aa
AA seq
DB search
MKPITLTIKGLHSFREEQTIDFSSLCDAGVFGIFGPTGSGKSSILDAMTLALYGKVERAL
NNTHGILNQAEEKLSVSFTFALQREHHISYKVERAFKRADEMKVRTTLCRLIEIGDTQTV
LADKASEVNRKIEELLGLTIDDFTRAVVLPQGKFAEFLSLKGADRRQMLQRLFNLEKYGD
QLVKRLRAKAQNHYGQKNELLAELTGLGEAGPEALAKAKEAAAQAQAIFLEKKQTRDEAF
TTFTKAQAIWQYQKEQEAYEKEQNKLNLLAPTMEEKKNQLRIAEQAETLKPYADALTKAE
KQLSQASKEKQEAEKHLLHQRTIYDQMTQEYEQTRQKKMENEPELLQKKEQLIQLKEIER
KKETALQEKTVLEQQNHEKAQQLTQKKAEAENLQSLLERALAKQTQLKHELEQLQVSVKE
RKLVQDALRFSENVQRMNVSIQKEEQKIEELRQRSAQATQSYEKLQKQQKDHHEKINQSF
QAIEQLYFYVCEFERGLTEWSHKEQDKKQEKLKQRDVVRSAELRKELAAELVDGEPCPVC
GSIHHDPNAVIDNDHEETVAQIDEWIVKMDKELKQAEEYARDMFAAKQLLETHANQLVKQ
FSFLSQKAPDSEVAAAVEAVQNPQSLHQLIQEWKGVKQDIQAIESKRARLMDVTYDQAAE
MSKVKDQLTFEQQRIQELDMLIKELRSEISEQLTQFEQTFPHLTINQVQEMQQQIDEKDQ
QAEGYQERIEKSISFLEEKQQAKEHLQTAIYDLEKELDKLAHQLGSQQHLIDQYETDLQR
YPLKAASLSDELDEVQQSLAHLNEKEQQSYEQFKHAQQLFSEAQSHFSSSERQLQEAKRR
KQEAEKAWQKETASTPFAHPQEIAPALMDRSVRLTVKQEIEEFEDKRKQCAANLKRISEL
LKGESLDEDEWTDIQLKKEAAEKALEEATALSGSAQEHLRVIEANHQRFASIHERLEELQ
QEIDRLDKLQTVFKGNTFVEFLAEEQLESVSRDASHRLGILTRQRYAIEVDSEGGFVMRD
DANGGVRRPVSSLSGGETFLTSLALALALSAQIQLRGEFPLQFFFLDEGFGTLDQDLLDT
VITALEKLQSQNLAVGVISHVEELKMRLPKKLIVHPADPSGKGTTVSMELM
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccgatcacgctaaccattaaaggacttcatagcttcagagaagagcaaaccatt
gactttagctccttatgtgatgcaggtgtgtttggtatttttggaccgactggaagcgga
aaatcgtctatattagatgccatgacactagcactctatggcaaggtcgaacgtgcactc
aataatacgcatggtattttgaaccaagctgaagaaaagctgtctgtctcctttacgttc
gctttgcaaagggaacaccatatttcttataaagtggaacgtgcctttaaacgggcagat
gaaatgaaggttagaacgacgttatgccgattgattgaaattggtgatacgcagacagtt
cttgcagataaagcaagtgaggtcaatcgtaaaatagaagaattacttggtttaaccatt
gacgattttacgagagcggttgttttaccccaaggaaagtttgcggaattcctttcattg
aaaggagccgacagacgccaaatgctgcagcgtttgtttaatttggagaaatatggtgat
cagctcgtcaaacgtttacgcgcaaaggctcaaaatcactatggtcagaaaaacgaactg
ctggctgaactgactggattaggagaagctggtccagaggcattagcgaaagctaaagaa
gcagctgcgcaggcgcaagctatttttcttgagaaaaaacaaacgcgggacgaagcgttc
actacttttacaaaagcgcaagccatctggcagtatcaaaaggaacaagaagcgtacgag
aaggaacaaaacaaactcaatctactggcaccaacgatggaagagaaaaagaatcaactt
cgcattgcagagcaggcagagacattaaagccttatgcggatgcattaacaaaggctgaa
aagcagctctctcaagcatcaaaagagaagcaggaagcagaaaaacatttacttcatcaa
cgaacgatctatgatcaaatgacgcaggagtatgagcaaacacggcaaaagaaaatggaa
aatgagccagagcttcttcaaaagaaagagcagctgattcaattaaaagaaattgaacga
aaaaaagaaacagctcttcaggaaaagaccgtactagagcagcaaaaccatgaaaaagcg
cagcaattgactcaaaaaaaagcggaagccgaaaacctgcaatctttattagagcgtgcg
cttgcgaaacaaacacagttgaagcatgagctggaacaattacaagtctctgtcaaagag
cggaaacttgtacaagacgcacttcgtttcagtgaaaatgttcaaagaatgaatgtgagc
attcaaaaggaagaacaaaagattgaggagctaagacagcgttcagcacaggcgacacaa
tcatatgaaaagcttcaaaaacagcaaaaagatcatcatgaaaaaataaatcaatcgttt
caagcgatagaacaattgtatttttatgtatgtgaatttgaacgaggtcttacagaatgg
agtcataaagagcaggacaaaaaacaagaaaaattaaaacagcgtgatgttgtcagatcg
gcagaattaagaaaagaattagcggcagagctagtagacggtgaaccatgtcctgtttgt
ggatcaattcatcatgatccaaatgctgtgatagacaatgaccatgaagaaacggttgcc
caaattgatgaatggattgtaaaaatggataaagagctcaagcaggcagaggaatatgct
agagacatgtttgctgcaaagcagctgcttgaaacgcatgccaatcaattagttaaacag
ttctcctttttatctcaaaaagcccccgattcggaagtagctgcagcagtagaagcagta
cagaatccgcagtctttgcaccagctgattcaagaatggaaaggtgtaaaacaagatatt
caagcaatcgaaagcaaacgagctcgtttaatggacgtcacttatgatcaagcggcagaa
atgagcaaagtaaaagatcaactgacatttgagcagcagcgcatacaagaactagacatg
ctgatcaaggagcttcgatctgagatttccgaacaactgacgcaatttgaacagaccttt
cctcacctgacaatcaaccaagtgcaggaaatgcagcaacaaattgatgaaaaggatcaa
caagcggaaggttatcaagagcgtattgagaagagtatttcttttctagaggaaaaacag
caggcaaaagagcatctgcaaacagccatatacgatctagagaaggaactcgataagctg
gcgcatcagctgggaagccagcaacacctgatcgatcaatatgaaacagatttacagcga
tatcctttaaaagccgcttctctttctgatgaactggacgaagttcaacaatctcttgct
catttaaatgaaaaagaacagcaatcgtacgagcaatttaagcatgcacagcaattattt
agtgaggcacaaagccatttctcaagcagtgaacgtcagctccaagaggcgaagcggcga
aaacaagaagctgagaaagcgtggcaaaaagaaacagcatctactccttttgctcatcct
caggagatagcacctgctttaatggatcgatctgtacgtcttacagtcaaacaggaaatt
gaggaatttgaggataaaagaaagcaatgtgcagcaaacttaaagcgaatttctgaactg
ttaaaaggtgagtcgctggatgaagacgagtggacagacattcaactaaaaaaagaagcg
gcggaaaaagcgcttgaagaagcgacagcgctgagtggatctgcacaagagcatctgcga
gtgattgaagcaaaccatcagcgctttgcaagcattcatgaacgccttgaagaactgcag
caagaaattgaccggctggataagcttcaaactgtgtttaaagggaatacatttgttgag
ttcctagcagaagaacagctagaaagtgtcagccgtgatgcttctcatcgtcttgggatt
ttgacaagacaaaggtatgccattgaagtcgattcagagggcggttttgtgatgcgggat
gatgccaatggaggtgtcagacgtccggtatccagcttgtctgggggagaaactttcctg
acgtctttagcacttgcccttgctctgtctgcacaaattcagctgagaggtgagttcccg
ctgcaattcttcttcttagatgaaggatttggtacgctcgatcaagacttgttagatacg
gtgattacagcattagagaagctacagtctcaaaatttggccgttggtgtgattagccat
gtggaagaattaaagatgagactgccaaagaaactgattgtccacccagcagatccaagc
gggaaaggaacaacagtctcgatggaattaatgtaa
DBGET
integrated database retrieval system
