Bacillus aerophilus: BAE_15810
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Entry
BAE_15810 CDS
T08735
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
baer
Bacillus aerophilus
Pathway
baer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAE_15810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baer03019
]
BAE_15810
Messenger RNA biogenesis [BR:
baer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BAE_15810
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Cas_Csa5
Motif
Other DBs
NCBI-ProteinID:
QAR54197
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All DBs
Position
3068849..3070516
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AA seq
555 aa
AA seq
DB search
MKKKNTENVRIIALGGVGEIGKNLYVIEIDSDIYVVDAGLMHPENEMLGIDVVIPDISYL
TERADRVKAIFLTHGHDEAIGGVFHCLSKLSVPVYGTKLTLALLREKLKQYGFNQKADLR
EVHAKSVITFETTKVSFFRTNHSIPDSVGISFKTSLGSIVCTGDFKFDQTPALNQACDIG
EIAKIGNNGVLALLSDSANAEKPGYTPSEALVQDEISNAMYNAENRVIVAVSSSNINRVQ
QIINATNQNGRKLAVAGKNMMTTLQLAIKLGYVTADEELFVPVQEVKKMAKNSVVILTAG
SHGEPLAALTKMAKQNHKQLHIEKDDTVVIASTPLPGQELTYSKTVDFLTRSGAQVIFAQ
KRVHVSGHGCQEELKLMLNLLKPKYLIPVNGEYRMQKAHSRIAEEVGMKRSDIFLIDKGD
VVEFRGQNVKIGEKVHQGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKQKKQL
ISGPEIITRGFVYVRESEELIVKATEMVKGIVKEQTENSIVEWSTLKQSMRDVLNQFLYE
KTKRKPMIIPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaaaaatacagagaacgtaagaattattgcactgggaggcgttggagaaatc
gggaaaaacttatatgtcattgagattgattccgacatatatgttgtagatgcaggactc
atgcatccagaaaacgaaatgctaggcattgacgtggtcattcctgatatctcttattta
acagaacgagctgatcgggtgaaagcaatttttcttacccacggacatgatgaagcaatc
ggaggcgtattccattgcttaagcaaattgtctgtaccagtttacggcacgaagctgacc
cttgcgttacttcgagaaaagttaaagcaatacggcttcaatcaaaaagctgatttgcga
gaggttcatgcaaagtcagtcattacatttgaaacaacaaaggtatcattctttagaacg
aatcacagtattcctgattcagtcggaatcagcttcaaaacatctcttggttcaatcgta
tgcacaggtgattttaaatttgatcaaaccccagcgcttaaccaagcctgtgacatcgga
gagattgcgaaaattggaaacaatggcgttttagcacttctttcagacagtgcaaatgct
gaaaaaccaggctatacaccttctgaggcgctcgtccaagacgaaatctcaaatgcgatg
tacaatgctgaaaaccgtgtgattgtggctgtatcttcatcaaatattaatcgtgtacag
caaatcattaatgccacaaaccaaaatggccgtaagcttgcagtagcagggaaaaatatg
atgacaacgcttcagcttgcgatcaaacttggttatgtgacagcggacgaagaattattt
gttccagtccaagaagtgaaaaaaatggcgaaaaacagtgtggtcattctcacagcagga
agccacggcgagcctctcgctgctttaacaaaaatggcgaaacaaaatcacaaacagctt
catattgaaaaagatgacacggttgtgattgcgtctacacctcttccaggacaagaactt
acctattcaaaaacggtggatttccttacaagaagcggagcacaagtgatttttgctcaa
aaacgtgtgcatgtatctggacatggctgtcaagaagagttaaagctcatgctgaactta
ctgaagccgaagtatttaattcctgtaaacggcgaatatcgcatgcaaaaagcacattct
cgtattgctgaagaagtgggaatgaaacgaagcgacattttcttaattgataaaggcgat
gttgtagaatttagaggacaaaacgtaaagatcggtgaaaaagtgcatcaagggaacatt
ttgatcgacggtcttggcgttggtgatatcgggaatattgtcttacgtgatagacgccta
ttgtctcaagatggcatcttaattgtggtcattacgctcgataaacaaaagaaacaatta
atttctggacctgagatcatcacaagaggatttgtttatgtaagagaatccgaagagctg
attgttaaagcaacagaaatggtcaaagggattgtgaaagagcaaacggaaaactcaatt
gttgaatggtcaacactgaaacaatccatgcgcgatgtactaaatcaattcctatatgaa
aaaacaaaacgtaagccaatgatcattccaattattatggaagtgtga
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