Bacillus sp. E25: DPQ26_01660
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Entry
DPQ26_01660 CDS
T11166
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
baez Bacillus sp. E25
Pathway
baez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DPQ26_01660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baez03019
]
DPQ26_01660
03009 Ribosome biogenesis [BR:
baez03009
]
DPQ26_01660
Enzymes [BR:
baez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DPQ26_01660
Messenger RNA biogenesis [BR:
baez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DPQ26_01660
Ribosome biogenesis [BR:
baez03009
]
Prokaryotic type
rRNA helicases
DPQ26_01660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
CMS1
NAT10_TcmA_helicase
DD_DDX21-DDX50
Motif
Other DBs
NCBI-ProteinID:
AXR20648
LinkDB
All DBs
Position
287595..289184
Genome browser
AA seq
529 aa
AA seq
DB search
MTTFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGAIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKVDRMEAPTLDEALEGQQRLIAEKLQSTIQNENLSYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDGRGGGDGRNRDGRN
RDGNRDRNRDGNRDRNRDGGSRGRRGEGQGRPGSSNGRGERKHHSRPQA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgagtctttactgcaatcggttgaaagtatg
ggctttgaagaggctacgccgattcaagctgaaacaattccacatgcattgcaaggtaag
gatattattgggcaagcgcaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacaaataaagaagcagttcaaggtattgttatcgcgccaacgcgt
gaattagcaattcaagttggagaagagctatacaaaattggtaaacataaacgtgttcgt
attctaccaatttatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcttacaaaacgtagagactgttgttcttgatgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcgattttaacagatgtgccagaaacacatcaaacattatta
ttctcagcgacaatgccagatccaatccgtcgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttactagatattcaatctcca
gagcttgcgatcgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgcagcagaaggtattcatggtgacttaacacaggcgaaacgtatg
tctgtattacgtaaatttaaagaaggtgctattgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggcgtaacacacgtatacaacttcgatatcccacaagat
ccagaatcatacgttcaccgtatcggtcgtactggccgtgcaggtaaaaaaggtattgca
atgttatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaagttgatcgcatggaagcaccgacacttgatgaggcattagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaagcacgattcaaaatgagaacttatcatactacaagcgt
attgcagaagaaatgttagaagagaatgactctgtaacagtagtagctgctgctttaaaa
atgatgactaaagagccggatacaactccgattgctttaacatcagaaccaccagttgtt
tcaagaggtggcggttctaaaaaacgtggcggtaacggaggcggataccgtgatggtaac
cgtaatcgtagtcgtgatggacgcggtggtggcgatggtcgtaaccgtgatggacgtaat
cgtgacggaaaccgtgatcgcaatcgtgatggaaaccgtgatcgtaatcgtgatggtggt
agtcgtggtcgtagaggtgaaggtcaaggtcgcccaggatcttcaaatggacgcggcgaa
agaaaacatcatagccgtccacaagcttaa
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