Bacillus sp. E25: DPQ26_17840
Help
Entry
DPQ26_17840 CDS
T11166
Name
(GenBank) type IA DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
baez Bacillus sp. E25
Brite
KEGG Orthology (KO) [BR:
baez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baez03032
]
DPQ26_17840
03400 DNA repair and recombination proteins [BR:
baez03400
]
DPQ26_17840
Enzymes [BR:
baez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DPQ26_17840
DNA replication proteins [BR:
baez03032
]
Prokaryotic type
DNA Topoisomerases
DPQ26_17840
DNA repair and recombination proteins [BR:
baez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DPQ26_17840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_Top1
Mnd1
C9orf72-like
Motif
Other DBs
NCBI-ProteinID:
AXR23543
LinkDB
All DBs
Position
3433829..3436486
Genome browser
AA seq
885 aa
AA seq
DB search
MGKTLFIAEKQKVAVELLKSPRFRNSQKYSGSMPYYGYYENENYIISWCRGHLLELKHPE
EMDSKYKVFKLEHLPLIYQPVYKVKQEYAEQLQTLVKLLQRHDVDHVVNICDADREGELI
YREVYEYAGVNKKQSRVYKSSFEAAELEGALNRLEPLTDYDGLAQSAKARQYLDYILGIN
VTRGCTSKLARNQFLLASGRVQMCILNEIRQREIAIQNYKEQTYYNLKLLTENGLSPVMK
TEDQLIDPSPLQKLGDSLKETNVIVTEFKESNRKKKPKLLYNLTDIYKDAHAKLKINAET
AKKHIQSLYEEGFITYPRSSSRHLPTEQVERVKEVMAALEKSTYANLVQQVIPSSITKKH
TTFNDELVSSHFAIIPTTKLYVGTNREPLEKQLYDLIVKRFIGNFMKPAIYLVREVHFID
QEGNTYSTKEKILQEKGFLSVFQEDIEEGSVEAFQIPILQEGDSFRIVQYDLIESRTKKP
AFHTESSILTFMETAGRKLDDEHLKELMKGKRIGTVATEETFIPKLLERSYIDVTNSQIR
TTNIGRAFIDAFPVDEIKNPAYTAEMEGMIYMIEKNEMKYEEFVEKTNTFVKDTVEQLGA
MDDKVSDSIINTWNQQIEVCKCPCRKGKILHKGNFYGCSNYPECEISLPKKIKEKAIPEA
QAKKLFEDKKTDLLKGFKSNEKEFSAYLVLHEGKVKFQFPTQEELSFGKCPKCKKGDMLH
RKTFYGCTEHKNGCDFMLPAKMKGKAIPGNQMKKLIQYKTTDFINGFQGEKGEFTAAIYM
EADGSLKFRFPTTEDRTIGKCPLCKSRVLVGKSNYLCEKYKKGCDFIIFGTFSGKNLSSN
HVKKLLEKNVTDQIKGFISNKNGKKFDARLSYSVQEKRLKFLFGK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaacattatttattgctgaaaaacagaaggtagctgttgaattattaaaatca
cctagatttagaaactctcaaaagtattcgggaagtatgccgtattatggctactatgaa
aatgaaaattacattattagttggtgccgggggcatttattagagttaaaacatccggaa
gagatggattccaagtataaggtatttaaattggagcatttacccttaatttatcagcca
gtttataaagtaaaacaagagtatgctgagcaactacaaacacttgttaaactgttgcag
cgtcatgatgttgaccacgtggtaaacatatgtgatgcggatcgagagggagaattaatc
tatagggaagtatacgagtacgctggggtaaacaaaaagcaatctcgtgtatacaagtca
tcttttgaggcagcagaattagaaggagcattgaatcgattagaaccattaacggattat
gacgggcttgcacaatcggctaaagcaaggcaatacctggattatattctagggattaat
gttacaagaggctgtacatccaaactagcaagaaaccaattcttattggcttctggtcgt
gttcaaatgtgtatcttgaatgaaatccgtcaaagggaaatcgctattcaaaattataaa
gaacaaacctattacaatttaaagctactaacggaaaacggtttatcaccagtaatgaaa
acagaagatcaactgatagatccatcgccactacaaaagcttggagatagcttgaaagaa
acgaatgtaattgtaacggaatttaaagaaagcaatagaaaaaagaaaccaaaattatta
tataacttaacggatatctacaaagatgctcacgccaaactgaagataaatgcggaaaca
gcaaaaaagcatattcagagtttgtatgaagaaggctttatcacatatcctcgttcttca
tccaggcatttacctactgagcaagtggaacgagtgaaagaagtaatggcagcattagaa
aaaagcacctatgcaaatctcgtacaacaagtaatcccatcttctattacaaaaaaacac
actacatttaatgatgaattagtcagtagtcactttgccatcatcccaacaacaaaatta
tatgtcgggaccaaccgagaaccattagaaaaacagttatatgacttaattgtaaaacga
tttatcgggaattttatgaaaccagcaatctacttggtaagagaagtgcattttatagat
caagagggcaacacatacagtacaaaagaaaagatcctacaagagaaagggtttctaagt
gtgtttcaagaggatatagaagagggatcagttgaagcattccagatacctattttacaa
gaaggagattctttcagaatcgttcagtatgacttgattgagtctcgaacgaagaaacca
gcctttcatacggaaagttccattttaacctttatggagacggcagggcgtaaattagat
gatgaacatttgaaagaacttatgaaaggaaaacggattgggacagtcgcaacggaagaa
acgtttattccaaaactgttagagcgaagctatattgatgttactaacagtcagattcga
actactaatattggtcgtgcgtttatagatgcttttccggtagatgaaatcaaaaatcca
gcttatacggctgaaatggaagggatgatctacatgatcgaaaagaatgaaatgaaatat
gaggaatttgtggagaaaacaaatacgtttgtaaaagacacagtggaacaattaggcgca
atggatgataaggtgtcggatagcattattaatacctggaatcagcagattgaggtgtgc
aaatgcccttgtagaaaaggaaaaatccttcataaaggcaatttttatgggtgcagtaat
tatccggaatgtgaaatctccttaccgaaaaaaattaaagaaaaagcgattccggaagcg
caagcgaaaaagctgtttgaggataagaaaacagatcttttaaaaggatttaagtccaat
gagaaggagttttccgcttatctcgtattacatgaagggaaagttaaatttcagttccca
acacaagaagagctgtcatttggtaaatgtccaaaatgtaaaaagggtgatatgcttcat
cgtaaaacattttatggatgcacggagcataaaaatggatgtgattttatgttaccagcc
aagatgaaaggaaaagcgattcctggtaatcagatgaaaaagttaattcagtataaaaca
acagattttatcaacggctttcaaggagaaaagggagaatttacagcagctatctatatg
gaagcggacggaagtttgaaattccgttttccaacgactgaagatcgtaccattggtaaa
tgtccattgtgtaagagtagagtccttgtagggaaaagtaactacttatgtgagaaatac
aaaaaaggctgtgacttcattatctttggtacattctctggtaaaaacctaagtagtaac
catgtgaaaaagttattagaaaagaatgtaacggatcagatcaaagggtttatctcgaac
aaaaacgggaaaaaatttgacgctcgtttatcatacagcgtacaggagaagcgattaaaa
ttcttattcggcaaataa
DBGET
integrated database retrieval system
