Bacillus sp. E25: DPQ26_21935
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Entry
DPQ26_21935 CDS
T11166
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
baez Bacillus sp. E25
Brite
KEGG Orthology (KO) [BR:
baez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
baez03016
]
DPQ26_21935 (truB)
Enzymes [BR:
baez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DPQ26_21935 (truB)
Transfer RNA biogenesis [BR:
baez03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DPQ26_21935 (truB)
Prokaryotic type
DPQ26_21935 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AXR24283
LinkDB
All DBs
Position
complement(4269105..4270028)
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AA seq
307 aa
AA seq
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MEGVVLLHKPKGMTSHDCVFKLRKVLREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLT
SETKTYEGEVTLGFSTTTEDASGEVVETKNIDRAITRKEIEKVLAELTGTIEQMPPMFSA
VKVNGKKLYEYARAGQEVERPVRTITIHEFVLLDDREVFEGENISFRFRVTCSKGTYVRT
LAVMIGEKLGFPSHMSHLVRTASGEFLLEDCISFEEIEENVQNGTVESIFISIDEALSKF
PKMVVDEKQAEKIKNGMFLKNELEITAPFITVFDKNDRCLAIYEHHPKHPGMLKPMKVLV
NNQELKL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtagtattattacataagccaaaaggcatgacatcacatgattgtgtattt
aaattaagaaaggtattgagagaaaagagaattggtcatacgggaacattagacccagat
gtaacaggagtattaccaatttgcgtcggaagagcaacaaaaattgcacaatttttaaca
agtgaaacgaaaacatatgaaggtgaagtaacattaggattttcaacgacaactgaagat
gcttctggtgaggttgttgaaacgaaaaatatagatcgtgctattactcgtaaggaaata
gaaaaagttcttgctgaattaacaggcacgattgaacaaatgccaccaatgttctcggct
gtaaaagtaaacgggaaaaaattatacgaatatgcaagagcaggacaagaggtggaacgt
ccagttcgtacaattacgattcatgagttcgtattacttgatgatcgtgaagtttttgaa
ggagaaaatatttcattccgtttccgtgtaacgtgtagtaaaggaacatatgtaagaacg
ttagcggtaatgattggggagaaacttggtttcccatcacatatgtctcaccttgtaaga
acggcatctggtgaatttttattagaagattgcatatcatttgaagaaattgaagaaaac
gtgcaaaatggaacagtagagtctatcttcatttcaattgatgaagcattaagtaagttt
ccaaaaatggttgtagatgaaaagcaagcagagaaaattaagaatggtatgttcttaaag
aatgaattagaaataacggcaccatttattacagtgtttgataaaaatgatcgttgctta
gcaatttatgaacatcatccgaaacatcctggcatgttaaagccgatgaaagtacttgtg
aataatcaagaactaaagctataa
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