Bacillus sp. E25: DPQ26_25805
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Entry
DPQ26_25805 CDS
T11166
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
baez Bacillus sp. E25
Pathway
baez03030
DNA replication
baez03410
Base excision repair
baez03420
Nucleotide excision repair
baez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPQ26_25805
03410 Base excision repair
DPQ26_25805
03420 Nucleotide excision repair
DPQ26_25805
03440 Homologous recombination
DPQ26_25805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baez03032
]
DPQ26_25805
03400 DNA repair and recombination proteins [BR:
baez03400
]
DPQ26_25805
Enzymes [BR:
baez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DPQ26_25805
DNA replication proteins [BR:
baez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DPQ26_25805
DNA repair and recombination proteins [BR:
baez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DPQ26_25805
NER (nucleotide excision repair)
GGR (global genome repair) factors
DPQ26_25805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
WHD_BrxR
DNA_pol_P_Exo
HHH_2
GFRP
Taq-exonuc
HHH
PknG_TPR
Motif
Other DBs
NCBI-ProteinID:
AXR25017
LinkDB
All DBs
Position
complement(4989399..4992032)
Genome browser
AA seq
877 aa
AA seq
DB search
MEKKVVLVDGNNIAYRAFFALPLLNNDKGIHTNAIYGFTMMLMRILEEEKPTHMLVAFDA
GKTTFRHKTYSEYKGGRQKTPPELSEQFPFIREMLDAFNVPRYELENYEADDIMGTLAKE
ASEQGASVKVISGDKDLLQLVSDNTLVCIPRKGITEVDEYTKEALFEKYSLSPKQIIDMK
GLMGDQSDNIPGVPGVGEKTAIKLLTQFGTVEEVYDNLDQVSGKKLKEKLEANKDQALMS
KDLATIITDAPITVHVDDMEYKGYEASDVVPMFESLGFTSLLNKLGVTPEETAPAELDDI
TFDIVEEVTEEMLQQDSALIVEVQEDNYHKADIQGFGIQNENGCYFIQKDIALKSDAFKD
WLADGEMRKHTFDAKRAIVALKWNGIDIQGVDFDLLIAAYLLDPADTDKDFRTVAKMKET
HAVKSDEEVYGKGAKRAVPELKVVAEHVARKVHVLYDVKQTFVEELEKNEQYELFTELEL
PLARVLADMEVKGVKVDTERLRNMGEELAGRLKEMEQEIYKLAGTEFNINSPKQLGVILF
ENLNLPVIKKTKTGYSTSADVLDKLMDHHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDS
SKIHTRFNQVLTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEEGWIMYAADYSQIEL
RVLAHIANDKGLVEAFQHDMDIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDY
GLSQNLGITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSR
NFNLRSFAERTAMNTPIQGTAADIIKKAMIIMADRLEEEGLQARLLLQVHDELIFEAPKE
EIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaggtcgtattagtagatggtaataatatcgcgtatcgtgctttctttgca
ctaccgcttttaaataacgacaaaggtatacatacgaacgcaatttacggttttacaatg
atgttaatgagaatattagaggaagaaaaaccgacgcatatgttagtagcatttgatgcg
ggtaaaacgacattccgtcataaaacatatagtgagtataaaggcggacgtcaaaagacc
ccacctgaattatcagaacaattcccgtttattcgtgagatgcttgatgcattcaacgta
ccgcgttatgaattggaaaattatgaagcggatgatattatgggaacgctagcaaaagaa
gcaagcgaacaaggagcaagtgtaaaagttatttcaggagataaagatttacttcaactt
gtttctgataacacgcttgtatgtattccgcgaaaagggattacggaagtagatgaatat
acgaaagaagctttatttgagaaatatagcttatcaccaaagcaaattatcgatatgaaa
ggtttaatgggagaccaatcagataatattccgggtgtaccaggagttggtgaaaaaact
gcgattaaattgttaacacagtttggaacggttgaagaagtgtatgacaatctagatcaa
gtaagcgggaagaaattaaaagaaaaactggaagcaaataaagaccaagctcttatgagt
aaagatcttgcaactatcattacagatgcgccgattacagtgcatgtggatgatatggaa
tataaaggatatgaagcaagtgatgtcgttccaatgttcgagagtttaggatttacatct
cttttaaataaattaggtgttacgccagaagaaacggctccagctgaattagatgatatt
acatttgatattgtggaagaagttaccgaagaaatgcttcagcaagatagtgcgcttatt
gttgaagtacaagaagataactatcataaagcagatattcaaggttttggtattcaaaat
gaaaatggttgctactttattcaaaaggacattgctcttaagtcagatgcatttaaagac
tggcttgcagatggagagatgagaaagcatacatttgatgcgaagcgtgcaatcgttgca
ctgaaatggaacggtatagatatacaaggggttgactttgatctattaatcgctgcttat
ttacttgatccggctgatacagataaagatttccgtactgtagcgaaaatgaaagaaacg
catgctgtgaaatctgacgaagaagtttatggaaaaggtgcgaagcgtgctgttccagag
ttaaaagtagtagcggagcatgtagctcgtaaagtgcatgtattatatgatgtaaagcaa
acattcgttgaagagttagagaagaatgagcaatatgaactgtttacagagttagaatta
ccacttgcgcgtgtattagctgatatggaagtaaaaggtgtaaaagttgatacagagcgt
cttcgtaatatgggagaagaacttgcaggcagattaaaggaaatggaacaggaaatttat
aagcttgcgggaacagaatttaatattaattcaccgaagcagcttggtgttattctgttt
gagaatttaaacttaccggttattaaaaagacgaaaacaggttattctacgtcagctgat
gtactagataagcttatggatcaccatgaaattattccaaacattttacattatcgtcaa
ttagggaaactaaattcaacttacattgaaggtttactgaaagttgtacatgaagattca
tctaaaattcatactcgttttaatcaagtgttaacacaaacaggtcgattaagttcgacg
gatccgaacttgcaaaatatcccgattcgattagaagaaggaagaaagattcgtcaggca
tttgttccatcagaagaaggttggattatgtatgcggctgattattcacaaatcgagctg
cgtgtattagctcatattgcaaatgataaagggctagttgaagcattccaacatgacatg
gatattcatacgaaaacagctatggatgtatttggcgttgaaaaagatgaagtaacttca
aatatgagacgacaagcgaaagctgttaacttcggaattgtgtatggtattagtgattat
ggtctttcgcaaaacttagggattacaagaaaagcagcagcggaatttattgaaaagtat
ttagaaagtttccctggtgtacaagaatacatggaggacatcgtaaaagatgcgaaacaa
aaaggatatgtggccacattattaaatcgtcgccgttatattccagaaattacgagtcgt
aatttcaatttacgtagctttgctgagcgtacagcgatgaatacaccaattcaaggtact
gcagcagatattattaaaaaagcgatgattattatggcagatcgtttagaagaagaaggc
ttacaagcgcgtcttcttctacaagtacacgatgaattaatatttgaagcaccaaaagaa
gaaattgaaaaattagagcagcttgtacctgaagtaatggagcatgcaattgaactcgca
gttccgctgaaagttgattattcttacggtccaacttggtacgacgcaaaataa
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