Borrelia afzelii (FLI): BAPKO_0353
Help
Entry
BAPKO_0353 CDS
T00383
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
baf
Borrelia afzelii (FLI)
Pathway
baf03420
Nucleotide excision repair
baf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
baf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAPKO_0353 (uvrD)
03430 Mismatch repair
BAPKO_0353 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baf03400
]
BAPKO_0353 (uvrD)
Enzymes [BR:
baf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAPKO_0353 (uvrD)
DNA repair and recombination proteins [BR:
baf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAPKO_0353 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BAPKO_0353 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_11
AAA_30
DEAD
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
ABH01610
UniProt:
Q0SNG8
LinkDB
All DBs
Position
complement(350147..352243)
Genome browser
AA seq
698 aa
AA seq
DB search
MDKIKNFFSSLNAFQEKIVFNKSKNPMLVLAGPGSGKTRVIIAKIVYLIKHMNINPNEIL
ALTFTNKAANEMNDRINDLLKFDKKLHIQTFHSFGAWLLRCYYKDFDKNYDSNFTIWDTN
DVVRFVKQINLASNLEMAKHIAGLILKDKENFFLGKFIEFTEKEYEYIKIYEEEKTKNNA
FDFSDLIIKPILMLRQSKSLKESVQSKFKVIFVDEYQDTNYSQFLFLKELYLDGMYFMVV
GDEDQSIYSFRGARIENILEFEKTFANVAKFYLVQNYRSSSNIVSIANGVISKNKNRYEK
QIITQNSYDKRMKFLVFQSTSDEAEYFSNLLVDNDVETAILYRFNSQSFHFETSFLKKNI
SYKVLGSIKFYDREEIKDIICLLRLFINRKDKIAFLRIINKPSRGIGKTTLDKIISVLND
DDVNFNLFCASKKVLSSLKNKAKESLLLFVNAYDELSKKLFEDNYINLSAFIEDVVIKFG
LLDYYKKFDKDEKLRNIDELINSGIEYSGTFEGLAIFLENSSLSPLISGDFKSNIFLSSI
HGVKGLEFDRVVISGLEKGLLPAEIEELTEDRLEEERRLFYVAITRAKSELIVTLNLRRA
FRGSFKRTALSVFFQDIDKNFYDIVFIPEYLKEYFNNFFIDNKRDIGFNIGDYIIYNEER
GMIVDIWYQGSLQFVKISLRNGKKAILSPEYIKKIIKV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggataaaataaaaaattttttttctagcttaaatgcttttcaagaaaaaattgttttt
aataaaagtaaaaatcccatgcttgttttagcagggcctggaagtggtaaaacaagggtt
ataattgcaaaaattgtgtatttaatcaaacatatgaatataaatcctaatgaaatttta
gctttaacttttaccaataaagctgcaaatgaaatgaatgacaggataaacgatctttta
aaatttgacaagaaacttcatattcaaacttttcattcttttggggcttggcttttaagg
tgttactataaggattttgacaaaaattatgattcaaattttacaatttgggatactaat
gatgttgttagatttgtcaaacaaattaatcttgcttcaaatcttgaaatggcaaaacat
attgcggggttgattttaaaagacaaagaaaattttttcttaggaaaatttattgaattt
acagaaaaggaatatgagtatatcaaaatttatgaggaagaaaaaaccaagaacaatgct
tttgatttctcagatcttattattaaacctattttaatgctgaggcagtctaaatctcta
aaagaatctgttcaatctaaatttaaagtcatttttgtagatgagtatcaagatacaaat
tattcacaatttttatttttaaaagaactttatttagatggtatgtattttatggttgta
ggagatgaagatcagtccatatattcttttagaggagctagaattgaaaatattcttgaa
tttgaaaaaacttttgccaatgttgctaaattttatttagtgcaaaattatcgttcaagt
tcaaatatagtgagtattgcaaatggggttatttcaaaaaataaaaatagatatgagaaa
caaataataactcaaaatagttatgataaaagaatgaaatttttagtttttcaaagcaca
tcagatgaagctgaatatttttctaacttacttgttgacaatgatgttgagacagcaata
ctttatagatttaattcccagtcttttcattttgaaacatcttttttaaagaagaatatc
tcatacaaggttttaggatcaattaaattttatgatagagaggaaataaaggatattatt
tgtttgcttaggctttttataaacaggaaagataaaatagcttttttgagaattataaac
aagccttctagaggaattggaaaaactactctagacaaaataattagtgttttaaacgat
gatgatgttaattttaatttgttttgtgcgagtaaaaaggttttgagttcgcttaaaaat
aaagccaaagaatctcttttattgtttgtaaatgcttatgatgagctgagtaaaaaactt
tttgaagataattatattaatttatctgcttttattgaggatgttgtaattaagtttggt
cttttagattattataaaaaatttgataaggacgaaaaattaagaaatattgatgagctt
attaatagcggaattgaatattcaggtacatttgaaggtcttgctatttttttagaaaat
tcttcactttcccctttaatttctggagattttaagtctaatatatttttgtcttcaatt
cacggtgtcaagggacttgaatttgatagagttgtgatttctggacttgagaaaggtctt
ttgccagctgaaattgaagaattaacagaagatagacttgaggaggagagaaggcttttt
tatgttgcaattacaagagctaaatcagagcttattgttaccttaaatttgaggcgagct
tttagaggttcttttaaaagaactgcgctttccgttttttttcaagatattgacaaaaac
ttttatgacattgtctttattcctgagtatttaaaagagtattttaataatttttttatt
gataataaaagggatattggatttaatattggagattatataatttataatgaagaaagg
ggaatgattgttgatatctggtatcaaggtagcttgcaatttgttaaaatcagcttgaga
aatggtaagaaggctattttgagtcctgagtatattaaaaaaattattaaagtttag
DBGET
integrated database retrieval system
