Borrelia afzelii (FLI): BAPKO_0530
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Entry
BAPKO_0530 CDS
T00383
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
baf
Borrelia afzelii (FLI)
Pathway
baf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAPKO_0530 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baf03021
]
BAPKO_0530 (rpoA)
03400 DNA repair and recombination proteins [BR:
baf03400
]
BAPKO_0530 (rpoA)
Enzymes [BR:
baf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAPKO_0530 (rpoA)
Transcription machinery [BR:
baf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAPKO_0530 (rpoA)
DNA repair and recombination proteins [BR:
baf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAPKO_0530 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RAD51D_N
Ribosomal_S6
Motif
Other DBs
NCBI-ProteinID:
ABH01773
UniProt:
Q0SN05
LinkDB
All DBs
Position
511560..512594
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AA seq
344 aa
AA seq
DB search
MPMERFLKDFTIPEKIEFLKSQDDGSYGKFTIYPFERGFGVTIGNTLRRVLLSSIEGYAI
TAMRVQSNNKDSSSKVVSSEFDLIPGVSEDTLEVIANIKNIHLKLREGEQRKTISFSVSG
KDTNVLKASHFERDGVEVFNKDLVIATLSHDVNLDFEFQINYGRGYVSSEQNSKYLEEVN
VIALDSIFSPIEKVSYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLF
PLVDFEDSVSVSFDKSKSESSNLLDMSIEKLDLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLGSYQLFLGMSKEDALSVLSKNVKISE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcccatggaaagatttttgaaagattttactatacctgaaaaaattgaatttttaaaa
agtcaagatgatggatcttatggtaaatttacgatatatccttttgaaagaggttttgga
gttactataggtaatactttaaggcgtgtgttgctttcttctattgaagggtatgctatt
actgctatgagagttcagtctaacaataaagactcttcatcaaaggtcgtttcaagtgaa
tttgatttgattcctggagtttctgaggatactcttgaagtcattgctaatattaaaaat
attcatttaaaacttagagaaggagagcaaagaaaaacaataagttttagtgttagtggt
aaagatactaatgttttgaaagcttctcattttgaaagggatggagttgaggtttttaat
aaagatttagttatagctactttatcacatgatgtgaatttagattttgaatttcaaatt
aattatggtagaggctatgtgtcttctgagcaaaattccaagtatttagaagaagttaat
gttattgctttggattctatattttcgcctatagagaaagtttcatattctgtagaagat
actagggttggtcaaaggtcagattatgataagcttgtaatggaaatttggactacaggt
gtgatttctgctaaagatgcaataaaaaaggctgcatcaatagtaagagagtttttgttt
cctcttgtagattttgaagatagtgttagtgtatcttttgataaatcaaaatcagaaagt
tctaacttacttgatatgagtattgagaaattggatttgtcagtcagatctttaaattgt
ttagccaaagaaaatgttagaactttaggggagcttattagtaaaaatgcagaagagctt
tctaaggctagaaattttgggaaaaaaagtttagaagagataatcgaaaaacttggttct
tatcaattgtttttaggaatgtccaaagaagatgctttatctgtattgagcaagaatgtt
aaaatatctgaataa
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