Borrelia afzelii (FLI): BAPKO_0640
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Entry
BAPKO_0640 CDS
T00383
Symbol
rep
Name
(GenBank) rep helicase, single-stranded DNA-dependent ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
baf
Borrelia afzelii (FLI)
Pathway
baf03420
Nucleotide excision repair
baf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
baf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAPKO_0640 (rep)
03430 Mismatch repair
BAPKO_0640 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baf03400
]
BAPKO_0640 (rep)
Enzymes [BR:
baf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAPKO_0640 (rep)
DNA repair and recombination proteins [BR:
baf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAPKO_0640 (rep)
MMR (mismatch excision repair)
Other MMR factors
BAPKO_0640 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
DEAD
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABH01879
UniProt:
Q0SMP9
LinkDB
All DBs
Position
636254..638233
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AA seq
659 aa
AA seq
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MPDDFFKKSLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLLLKGIAQKEILALT
FTNKAANEMKDRIKKILKSPLSNLMVSTFHAFGLFFLKENYKLLGYRKNFSIYDDNDRIS
LLKEILLDEGLLNKKVSLNSLSNVISLFKNGILTLNDLKEEDINIFRLYEERLRLYNSFD
FDDLILKPKELLSNNSDIRNKYSKRYKYVLIDEFQDTSLIQYNFIRLLINHSNLCCVGDD
DQSIYSWRGASYNNMLQFEKDYNAKEIKLEQNYRSAKNILDVANSVILNNKNRKEKTLWS
SKMCSKVIDFFIFEDEIQESEFVASQIIELSKLEGFQSKKIGVLMRTNALFKNVEMIFKR
QGIKYKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINIPRRGIGKEYLKKIRDM
ADKKGCCIYDALCDIAFSFASISSYDKVLNKQVIESIEDFVSFIEEYQYKFSIKKNTYSN
IIKEMIESIEYWGFLVSENPNSIKVAEYKYQNIEGFLSIIKNWESKQLGELRDLSSFLNY
IVLQSNEVSEESENININLMTVHSAKGLEFDYVFFIAVEDNIIPHHRIIEDSELDLEEER
RVFYVALTRAKDSLVITMANKRKKDRQIFEQLPSRFISEIPKEFLNFNYYADFIENKAR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgatgatttttttaaaaaatctctcaatcaatttcagtatgaagcagttaccact
attgaaggtgcccttttaattattgctggtgctggtagtggaaaaacaagagttgttact
catagaatagcttatttgcttttaaaaggcattgctcaaaaggaaattttagccttaact
tttaccaacaaggcggctaatgaaatgaaggatagaattaaaaaaattttaaaaagtcct
cttagcaatcttatggtttcaacttttcatgcttttggacttttctttttaaaagaaaat
tataaattgttaggatatagaaaaaacttcagcatttatgatgataatgatagaatttct
cttcttaaagagattttacttgatgagggccttttaaataaaaaagtttccttaaattca
cttagtaatgttatttcactttttaaaaatggaattcttacccttaatgatttaaaggaa
gaagatataaatatttttagactttatgaagagcgattaaggctttataattcttttgat
tttgacgatttgattttaaaaccaaaagaattgttaagtaataattctgatattagaaat
aaatattctaaaagatataagtatgttttgattgatgagtttcaagatacttctttgatt
caatataattttattcgtcttttgataaatcatagtaatttatgttgtgttggagatgat
gatcaatcgatatattcttggcgtggggctagttataataatatgttgcaatttgaaaaa
gattacaacgccaaagaaataaagcttgaacaaaattatcgttctgcaaaaaatatttta
gatgttgccaattctgtgattttaaataataaaaataggaaagaaaagactttgtggtct
tcaaagatgtgtagcaaagttatagatttttttatatttgaggatgaaattcaagaatct
gagtttgttgcaagccaaatcatagagctttcaaagctagaaggttttcaatctaaaaag
ataggagttcttatgagaactaatgctctttttaaaaacgttgaaatgatttttaaaaga
cagggcataaaatataaagtttcagggggaacatcttttttccaaagaaaagaaataaaa
gatattatttcttatttaaatgtaataataaatcctaaaagtgattatgatctgcttaga
atcattaatattccaagaagggggattggcaaggaatatttgaaaaaaattagagatatg
gcagacaagaaaggctgttgtatttatgatgctctttgtgatattgctttttcttttgca
agcatttctagttatgataaagttttaaataaacaagtcattgaaagtatagaagatttt
gtatcttttattgaagagtatcaatataaatttagcataaaaaaaaacacgtattctaat
ataatcaaagaaatgatagaaagtattgaatattggggatttttagttagtgaaaatcct
aattcaattaaagtagctgaatataaatatcaaaatatagaagggtttttaagtataatt
aaaaattgggaatctaaacaattaggtgaattgagagatttaagtagttttttaaactat
atagttcttcaatctaatgaagtaagtgaggaatctgaaaatatcaatattaatttaatg
acagtgcactctgctaaaggcttggaatttgattatgtattttttattgctgttgaagac
aatattattcctcatcatagaatcattgaagatagtgaacttgacttagaagaagagagg
cgagttttttatgttgcattaactcgtgcaaaagattctcttgttattactatggctaat
aagcgaaaaaaagataggcaaatttttgagcagttgccttcaagatttatttcagaaatt
cccaaagaatttttaaattttaattattatgcagattttattgaaaataaagcccgataa
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