Borrelia afzelii (FLI): BAPKO_0675
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Entry
BAPKO_0675 CDS
T00383
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
baf
Borrelia afzelii (FLI)
Pathway
baf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAPKO_0675 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baf03400
]
BAPKO_0675 (recD)
Enzymes [BR:
baf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BAPKO_0675 (recD)
DNA repair and recombination proteins [BR:
baf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAPKO_0675 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Viral_helicase1
PIF1
UvrD_C_2
SLFN-g3_helicase
NAT10_TcmA_helicase
AAA_22
T2SSE
RsgA_GTPase
NPHP3_N
RNA_helicase
AAA_16
AAA_5
FtsJ
AAA_24
AAA
DUF3349
AAA_28
Zeta_toxin
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABH01906
UniProt:
Q0SMM2
LinkDB
All DBs
Position
complement(666937..668769)
Genome browser
AA seq
610 aa
AA seq
DB search
MRDFLVLREFLKDKNKKFLTPELKLYEIIELLNINKKNYYKAQTLAKSINNENIVIFLIF
LFNYFDKGHLRANINLLAKDIQNTITFTKDNLEKTNKDYNKLIKMLKSLEIFGNLETIKD
IVSLLKKSNILMEFNKFKITTPLILENNIYIYTQKNYREEEDLIKQIIKRLENNKSELND
TEIQNIISNLNTNNLNKDQITSVRKALKSNFFLLSGGPGTGKTTTINYILKAINKTLNNK
KKRIVAIGAPTGKASLRLQASIDYSFENLEIECNTIQKLLGIKFINKKNLYDEENQLNFD
VIIIDEASMVDAYTFLKLLKATPITTKLIMVGDKNQLPSVNEGNVYSSLLGIENINKDNV
VDLKENFRSNKEINLLSKAIYKEDITLICKYINNNKNIQLKEIEKINLKKDLIEYANNLY
GKISTFNLKLLKDSKIETILETLLENIILSSKNFGKFGTKKLNEIIKTYLKKIYGNFIGQ
IIMITKTDYKNKLFNGERGVIFNENSKFYALFQRKDEKYKKINLDLLTNYEFSFATTIHK
SQGSEYKHIKVILENNPFLTKELMYTAITRAKDSLEIISNKETILKLSKKSCERDSKILE
HLNSFKEIDK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagagattttttagtattaagagaatttttaaaagataaaaacaaaaaattcttaact
cctgaacttaagctttatgaaataattgaacttttaaatatcaataaaaaaaattactat
aaagcacaaacacttgcaaagtccataaacaatgaaaacattgtaatatttttaatattt
ttatttaactactttgacaaaggccacttaagagctaatataaatctattagcaaaagac
attcaaaatacaataacattcacaaaagataacctagaaaaaaccaataaagattataac
aaattaataaaaatgctaaaaagtttagaaatatttgggaatctagaaactattaaagat
atagtctcgcttttgaaaaaaagcaacatactaatggaatttaataagtttaaaattaca
actcccctaatcctggaaaacaatatctacatttatactcaaaaaaactatagagaagaa
gaagatttaataaaacaaattataaaaagattagaaaacaataaaagtgaattaaatgac
accgaaatacaaaatataatatcaaatttgaacaccaataatttaaataaagatcaaatc
acatccgtgagaaaggcattaaaaagcaacttttttctattaagcgggggccctggaaca
ggcaaaactacaactattaactatatcttaaaggcaattaacaaaacattaaacaataaa
aaaaaaagaatagtagcaattggagcacctacaggaaaagccagcttaagactacaagca
agtatcgattattcattcgaaaatttagaaatagaatgcaatacaatccaaaaactattg
ggaatcaaatttataaacaaaaaaaatctatatgatgaagaaaatcaactaaattttgac
gtaataataattgacgaagcttcaatggtagatgcatatacttttttaaagctattaaaa
gcaacaccaataactactaaattaataatggtaggagataaaaatcaacttccatcggta
aatgaaggaaatgtatattcaagtcttctaggaatagaaaatataaacaaagataatgta
gtagatcttaaagaaaatttcaggagcaacaaagaaataaacttgctctcaaaagccata
tacaaagaagatatcaccttaatttgcaaatacattaataacaataaaaatattcaatta
aaagaaatagaaaaaataaatttaaaaaaagatctaatagaatatgcaaacaacttatat
ggaaaaatatccacttttaatcttaaattactaaaagattcaaaaattgaaacaatactt
gaaactttacttgaaaatataattttaagttcaaaaaattttggaaaatttggaactaaa
aaactaaatgaaataataaaaacttacctaaaaaagatctatggaaactttattgggcaa
ataataatgataactaaaactgactataaaaataaattatttaatggagaacggggtgtc
atttttaatgaaaattctaaattttatgctttattccaaagaaaagatgaaaaatataaa
aaaataaatctagatttactaacaaattatgaattcagctttgctacaacaatacacaaa
agccaaggatctgaatataaacatataaaagtaatattagaaaataacccttttttaaca
aaagaacttatgtatactgcaataacaagagctaaagatagcttagaaataatttctaat
aaagagactattcttaagctaagcaaaaaatcttgcgaaagagattcaaaaatactagaa
cacttaaactcatttaaagaaattgacaaataa
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