Borrelia afzelii (FLI): BAPKO_0676
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Entry
BAPKO_0676 CDS
T00383
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
baf
Borrelia afzelii (FLI)
Pathway
baf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAPKO_0676 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baf03400
]
BAPKO_0676 (recB)
Enzymes [BR:
baf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BAPKO_0676 (recB)
DNA repair and recombination proteins [BR:
baf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAPKO_0676 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PDDEXK_1
Viral_helicase1
AAA_30
AAA_22
UvrD_C_2
PhoH
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABH01907
UniProt:
Q0SMM1
LinkDB
All DBs
Position
complement(668766..672278)
Genome browser
AA seq
1170 aa
AA seq
DB search
MDKILEKIQNNSKILIEASAGTGKTYILENLVINLMKTKLYSINEILVLTFTKKATEEMH
ARILKAIENAYFNSKTNEILKKAYEQSKKLFISTINKFSLHALNNFQIETENYSKYKPKE
KFSKEIDEIVYDFLRKSDSLIQALDIKDYELKVFKSDAKKTEEIVLKIKKAYERDTTQEL
GDWLKTQTPFENILLKKEELIKDYNKIIENLDEMTADEILNFYNKHIQTGKLEIEYSKEN
DIFKIAETLLKNKFFSTLIEKEIKKNTKLSPKELKIKNDLIHLGINIKHEKYKSEDNRNK
NRNNLKQYVILKVEYKILKYIEKKLEKIIKSTNTIDQNYIISNLKNYLKSEDKKLLNAIK
NRYKIILIDEAQDLSLTQIEIFKILKTAGIKLIFIADPKQIIYSFRKADISFYNKEIKNK
INTDARIVLKTNHRSSKKLINPFNRIFDNIYNNTIVHDIEKIEFTNSLPNQKNDNNNIFI
NGQEIEGINIITTNTENEEDIYQKTALTIKYLLTYGTITENNKIRNIKMQDIKVLCRGKN
EINLIDKALKKELIQTNKTQEKFLKTKEFSEIFYILKCLDRKQSFKALNYILNSKILNVP
WNLQRILIKQDKIHLIEEFIENITALLEKNEITLINAINKITLEKNLWIKIANSTNDQKI
IKWAENKINYKGLLIKEGKLENLKTYETVLEIISKIYHKEQNIQSLISTLESLIINEEPE
EIEERINNINNDNESIELMTIHKSKGLSINIVFLINTSPIENSNIFSKKNCFYKFYQNGK
IEYDFFKLEENKKYARLKILSEEKNIFYVGATRAKFALFITKTNSITSKLLEIAKIFTID
GIKHDFNIYEFISQKKFNKKKNNTNTNTKLIPPKPIIKNMFKKEYTSSFSSLTAQAHHTT
FYENYDFKNTNYEKETDLDDYDPTLEETLPKGKDSGNILHAAMEEIIFSTAKDTFDNFKK
NNIKIIEKQIQKINSNLNTIEIQNSLTKMIYNILTYNIRAINARLCDIEELQKEMEFLIK
INPKFQKQKNLFNKHFEDLHIKLSDGYLKGIVDLIFKANNKIYILDYKTNYLGKDKDDYN
ITNLENIIKKEYYDLQYKIYALGIKKILFKTKREYDQKFGGIIYLFTRAFKDNIDCLQSK
FENGIYFDLPKFNDVNLDEIILELSIKRHL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatcctagaaaaaattcaaaataactcaaagatattaatagaagcatcggca
ggcactggcaaaacttatatacttgaaaatttagttatcaatttaatgaaaaccaaactt
tactctataaatgaaatcttggtattaacttttacaaaaaaagccacagaagaaatgcat
gcaagaatactaaaagcaatagaaaatgcttattttaactcaaaaacaaatgaaatttta
aaaaaagcttatgagcaatcaaaaaaactctttatatcaacaatcaataaattttcatta
catgccttaaataattttcaaattgaaacagaaaattattccaaatataaacctaaagaa
aaattttcaaaagaaatagatgagatagtttatgactttttaagaaaatcagacagcttg
attcaagctcttgatattaaagactatgaactcaaagtatttaaatctgatgctaaaaaa
acagaagaaattgttttaaaaataaaaaaagcttacgaaagagacacaactcaagagctc
ggagactggcttaaaacccaaacaccatttgaaaacattcttcttaaaaaggaagaattg
atcaaagattacaacaaaataatagaaaacttagatgaaatgacagcagatgaaatatta
aatttttataataaacatattcaaactggcaaacttgaaatagaatattctaaagaaaac
gacatattcaaaatagcagaaacattattaaaaaataaatttttttcaaccctaatagaa
aaagaaattaaaaaaaataccaaattatcacctaaagaacttaagattaaaaatgattta
atccatttaggaattaatattaaacatgaaaaatacaaatcagaagacaatagaaataaa
aatagaaataatttaaagcaatatgttattttaaaagttgaatacaaaatactaaagtac
atagaaaaaaaactagaaaaaattattaaatccacaaacacaatagaccaaaattacata
atttcaaatttaaaaaattacttaaaatcagaagacaaaaagcttctaaatgcaatcaaa
aatcgatacaaaatcattttgattgatgaggcacaagacttaagcttaacccaaatcgaa
atatttaaaatattaaaaacagcaggaataaaattgatattcatagctgaccccaaacag
ataatatattcctttagaaaagcagacatttcattttataacaaagaaataaaaaataaa
attaacacagatgctagaattgtattaaaaacaaatcatagatcaagtaaaaagctcatc
aaccctttcaatagaatttttgataatatatacaataatacaatagtccatgatattgaa
aaaattgaatttaccaattcacttccaaatcaaaaaaatgacaataacaacattttcata
aacggacaagaaatagaaggaatcaatataataactacaaataccgaaaacgaagaagac
atttaccaaaaaacagcattgacaataaaatacttgcttacatatggaacaattactgaa
aacaataagattagaaatattaaaatgcaagacattaaagtactttgtagaggaaaaaat
gaaatcaatttaatagataaagcattaaaaaaagagctaatccaaacaaacaaaactcaa
gaaaaatttttaaaaaccaaagaatttagcgaaattttctatattcttaagtgcttagac
cgaaaacaaagttttaaagccttaaattatattctaaacagtaaaatactaaatgtacca
tggaatttgcaaagaattttaatcaaacaagacaaaattcaccttatagaagaatttatt
gaaaatataacagctttgcttgaaaaaaatgaaataacattaataaatgcaattaacaaa
atcacactcgaaaaaaacttgtggatcaaaattgcaaatagcaccaacgatcaaaaaatt
attaaatgggcagaaaataaaataaattacaaaggtcttcttattaaagaaggcaagctt
gaaaatttaaaaacctatgaaacagtacttgagatcatatctaaaatatatcataaagaa
caaaacatacaatctctaatctctactttagaaagcctaataataaacgaagaacctgaa
gaaatagaagaaagaatcaataatataaataatgacaatgaatctatagaactgatgaca
atacacaaatcaaaagggcttagtataaatatcgtattcttaataaatacatctccaata
gaaaatagcaatattttttcaaaaaaaaattgtttttacaaattttatcaaaacggaaaa
attgaatatgatttttttaaattggaagaaaacaaaaaatatgcaagactaaaaatatta
agtgaagaaaaaaatatattttatgtgggggcaacaagagctaaatttgctctttttatt
acaaaaacaaatagcataactagcaaattattagaaatagcaaaaatttttactattgat
ggcatcaaacatgactttaacatatatgaatttattagccaaaagaaattcaataaaaaa
aagaacaatacaaatacaaatacgaaattaattccaccaaaaccaataattaaaaacatg
tttaaaaaagaatatacatctagtttttcaagcttaacagcacaagctcatcatacaaca
ttttacgaaaactatgattttaaaaacaccaactatgaaaaagaaacagatcttgatgat
tacgaccctacattagaagagactctgcctaaaggaaaagatagtggaaacattttgcat
gccgcaatggaggaaataatttttagtacagcaaaagatacatttgataattttaaaaaa
aataacattaaaattattgaaaaacaaatacaaaaaattaactcaaatcttaatacaata
gaaatacaaaattcattaactaaaatgatttataatatactaacttataatataagagca
attaatgctcgtctgtgcgatattgaagaattacaaaaagaaatggaatttttaatcaaa
ataaatcctaaatttcaaaaacaaaaaaatctttttaacaagcactttgaagatcttcac
ataaaactaagcgatggatatttaaaaggaatagtagatctcatatttaaagctaataat
aaaatatatatcctggattacaaaacaaactatcttggaaaagataaagatgattataat
ataacaaatttagaaaatataataaaaaaagaatattatgatttgcaatataaaatatat
gcacttggaataaaaaaaatattatttaaaactaaaagagaatatgatcaaaaatttggt
ggaataatatatctttttacaagagcatttaaagataatattgactgcttgcaatcaaaa
tttgaaaatggcatttattttgatcttcccaaatttaatgatgtgaacttagatgaaatt
atcctagaattaagtattaaaaggcacttatga
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