Borrelia afzelii (FLI): BAPKO_0819
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Entry
BAPKO_0819 CDS
T00383
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
baf
Borrelia afzelii (FLI)
Brite
KEGG Orthology (KO) [BR:
baf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baf03021
]
BAPKO_0819 (rpoS)
Transcription machinery [BR:
baf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAPKO_0819 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_10
Sigma70_r1_2
HTH_23
HTH_28
Phage_terminase
GerE
Homeodomain
Sigma70_r4_2
KORA
Fe_dep_repress
Formin_GBD_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ABH02044
LinkDB
All DBs
Position
complement(815946..816746)
Genome browser
AA seq
266 aa
AA seq
DB search
MNIFSNEDLNIYLKSVREHKLITHEEEIQLVGQIQRGSAKAKNKMINANLRLVLKIIKRY
AGKGLKIEDLIQEGNLGLIRAAEKYDPNKNTKFSTYASFWIKQSLQRALNTKTRLVKVPY
RKENLILQINKYLTEEEKAPKKEEIMKRFNLSPAQYIKIIPYLEKEYSLDKEIEGSENST
LLNLYEDNSFNPEITLEQDSTLQHLNYILETKLTEKERYIIKKRYNLDNSPKKSTLKDIS
TELGISSETVRQIEKRVLKKLKEEIN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatttagcaatgaggatttaaacatatatttaaaatcggtaagagaacataaa
ctaattactcacgaagaagagattcaacttgtaggacaaatacaaagaggcagcgcaaaa
gcaaaaaataagatgataaatgcaaatttgcgacttgttttaaaaataataaaaagatat
gcgggaaaagggttaaaaattgaagacttaattcaagagggcaacttaggattaataaga
gccgctgaaaaatatgacccaaataaaaacactaaattttcaacttatgcatctttttgg
atcaagcaatcgctccaaagagcattaaacactaaaactagattagtaaaagtcccatac
agaaaagaaaatctaatactgcaaataaacaaatatttaacagaagaagaaaaagcgccc
aaaaaagaagaaataatgaaaagatttaatctatctcctgcccaatatataaaaattatt
ccttatcttgaaaaagaatattctctggataaagagatagaaggatctgaaaattcaaca
ctcttgaatctatatgaggacaattcttttaaccctgaaattacccttgaacaagactca
actttacaacatttgaattacatacttgaaacaaaattaactgaaaaggaaagatacata
atcaaaaaaagatacaacctagacaatagtcccaaaaagagcaccttaaaagatatttca
acagaacttggaatatcatcagaaactgtaagacaaattgaaaaaagagttctaaaaaaa
ctaaaagaagagataaattaa
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