Bacillus sp. FCW2: K3G25_05715
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Entry
K3G25_05715 CDS
T10657
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bafc Bacillus sp. FCW2
Pathway
bafc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bafc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K3G25_05715 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bafc03021
]
K3G25_05715 (rpoD)
Transcription machinery [BR:
bafc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K3G25_05715 (rpoD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UHC66102
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Position
1135607..1136728
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AA seq
373 aa
AA seq
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MADKQTHETETELTLDQVKEQLTETGKKRGVLTYEEIAERMSSFEIESDQMDEYYEFLGE
QGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAK
EEITYAQKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPT
PEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaaacccacgaaacagaaacagaacttacattagaccaggtaaaagag
cagcttactgaaactggaaaaaaacgtggcgttttaacatatgaagaaattgctgaacgc
atgtccagctttgaaattgaatcagaccaaatggatgagtattatgaatttttaggagaa
caaggtgttgaattaattagtgaaaatgaagaaacggaagatcctaatattcaacagctt
gccaaagccgaagaagaatttgaccttaatgacctcagcgtaccgcctggcgtaaagatc
aatgatccagtccgcatgtaccttaaggaaatcggacgggtaaaccttctttctgctaaa
gaagaaatcacctacgctcaaaaaattgaagagggtgacgaggaatctaaacgcagactg
gctgaagcaaaccttcgtttagttgtcagcattgctaaacggtatgtcggccgcggcatg
cttttcttagacttgatccaagaaggaaacatgggtctcatgaaagccgtcgagaagttt
gactaccgtaaaggatataaattcagtacgtatgcgacttggtggatcagacaggcgatt
acacgcgccatcgctgaccaggcgagaacaatccgtatcccggttcacatggtggaaacc
atcaacaaattaatccgggtgcagcgtcagcttcttcaggatcttggcagagagccgaca
ccggaagagattgctgaagacatggatcttacgcctgaaaaagtccgtgaaatattaaaa
attgctcaagagcctgtttctttagaaacgccgatcggtgaagaagacgactcacatctc
ggtgacttcatcgaagaccaggaagcgacatctccgtcggatcatgcggcatatgagctt
ttaaaagaacagctggaagatgtgctggatacgttgacagatcgtgaagaaaacgtgctg
cgtctccgtttcggtctggatgacggacgcacaagaactttggaagaagtcggcaaagtg
tttggagtaacgagagagcgtattcgccaaattgaagcaaaagcgcttcgcaaattgaga
catccaagcagaagcaaacgtctgaaggattttctcgaatag
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