Bombus affinis (rusty patched bumble bee): 126913926
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Entry
126913926 CDS
T09368
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126913926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126913926
03019 Messenger RNA biogenesis [BR:
baff03019
]
126913926
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126913926
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126913926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
126913926
NCBI-ProteinID:
XP_050573188
LinkDB
All DBs
Position
2:9275771..9277517
Genome browser
AA seq
286 aa
AA seq
DB search
MECLVANVDNMRFDIEIALDEQYGALPLPFTGMDKSTAAVCQFYPRGTCVKGASCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPEGPNCKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQEIEGNSHATHHMNMHNGPPPRGPQ
KPLEEVTCYKCGTKGHYANKCPKGHLAFLSHAGGSGSATQNQNYRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtctagtggcgaatgtggataatatgcgatttgatatagaaattgctcttgac
gaacagtatggagcacttcctttaccttttactggaatggacaaatctactgctgcagta
tgtcaattttatccaagaggtacatgtgttaaaggagcctcttgtccatttagacacgta
cgtggagatcgtacaatagtatgtaaacattggttaagaggtctttgtaaaaagggtgat
caatgtgaatttttacatgagtatgatatgacaaaaatgccagaatgttatttctattcc
agatttaatgcttgtcacaataaagaatgtccattcctacatattgacccagaaactaaa
gtcagagattgtccttggtatgatcgtggattctgcagacatggacctttatgcagacat
cgacatgttcgtcgtgttttatgcatggcttatttagctggattttgtcctgaaggccca
aactgtaaatttatgcatccaagatttgaattgccagcagtgcaagatatgcaacctaaa
gaaggaaaaaaggtaatgatcacgtgtcacttttgtggggaaggtggccataaagcaatt
tattgtaataaaatgccacctgatgtacgtgaagctcaagttagacaagaaatagaaggt
aattctcatgctacgcatcacatgaatatgcataatggacccccaccaagagggccgcaa
aagccactagaagaagtcacttgttacaaatgtggaactaaaggtcattatgccaataaa
tgtccaaaaggacatttagcatttttaagccatgctgggggtagtggaagtgctactcag
aatcaaaattaccgtagatga
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